Evidence map›Paper›PMID 28558657›Full record

ArticleBMC plant biology2017

Genome-wide identification of markers for selecting higher oil content in oil palm.

Bin Bai, Le Wang, May Lee, Yingjun Zhang, Rahmadsyah, Yuzer Alfiko, Bao Qing Ye, Zi Yi Wan, Chin Huat Lim, Antonius Suwanto and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Genomic selection for morphological and yield-related traits using genome-wide SNPs in oil palm.Molecular breeding : new strategies in plant improvement · 2022
    Article
  9. Molecular approaches for improving oil palm for oil.Molecular breeding : new strategies in plant improvement · 2021
    Review
  10. Phenomics, genomics of oil palm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 3 countries.

Bin BaiTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Le WangTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
May LeeTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Yingjun ZhangTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
RahmadsyahR & D Department, Wilmar International Plantation, Palembang, Indonesia.
Yuzer AlfikoBiotech Lab, Wilmar International, Jakarta, Indonesia.
Bao Qing YeTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Zi Yi WanTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Chin Huat LimR & D Department, Wilmar International Plantation, Palembang, Indonesia.
Antonius SuwantoBiotech Lab, Wilmar International, Jakarta, Indonesia.
Nam-Hai ChuaTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore.
Gen Hua YueTemasek Life Sciences Laboratory, 1 Research Link, National University of Singapore, Singapore, 117604, Singapore. genhua@tll.org.sg.ORCID 0000-0002-3537-2248
Temasek Life Sciences Laboratory · SGIPB University · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOil palm (Elaeis guineensis, Jacq.) is the most important source of edible oil. The improvement of oil yield is currently slow in conventional breeding programs due to long generation intervals. Marker-assisted selection (MAS) has the potential to accelerate genetic improvement. To identify DNA markers associated with oil content traits for MAS, we performed quantitative trait loci (QTL) mapping using genotyping by sequencing (GBS) in a breeding population derived from a cross between Deli Dura and Ghana Pisifera, containing 153 F

resultsWe constructed a high-density linkage map containing 1357 SNPs and 123 microsatellites. The 16 linkage groups (LGs) spanned 1527 cM, with an average marker space of 1.03 cM. One significant and three suggestive QTL for oil to bunch (O/B) and oil to dry mesocarp (O/DM) were mapped on LG1, LG8, and LG10 in a F

conclusionsA linkage map with 1480 DNA markers was constructed and used to identify QTL for oil content traits. Pyramiding the identified QTL with beneficial genotypes associated with oil content traits using DNA markers has the potential to accelerate genetic improvement for oil yield in the breeding population of oil palm.

Indexed as

ArecaceaeChromosome MappingGenome, PlantGenotyping TechniquesPlant OilsQuantitative Trait LociPlant OilsMappingOil yieldPalm oil contentQTLRAD-seq

Identifiers

PMID28558657
PMCPMC5450198
OpenAlexW2619874808

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.