Evidence map›Paper›PMID 28555368›Full record

ArticleCurrent genetics2017

A mutated dph3 gene causes sensitivity of Schizosaccharomyces pombe cells to cytotoxic agents.

Desirée Villahermosa, Karen Knapp, Oliver Fleck

Open access · hybridAbstract read
In one paragraph

Article in Current genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Desirée VillahermosaNorth West Cancer Research Institute, Bangor University, Bangor, LL57 2UW, UK.
Karen KnappNorth West Cancer Research Institute, Bangor University, Bangor, LL57 2UW, UK.
Oliver FleckNorth West Cancer Research Institute, Bangor University, Bangor, LL57 2UW, UK. o.fleck@bangor.ac.uk.ORCID http://orcid.org/0000-0003-0550-6513
Bangor University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dph3 is involved in diphthamide modification of the eukaryotic translation elongation factor eEF2 and in Elongator-mediated modifications of tRNAs, where a 5-methoxycarbonyl-methyl moiety is added to wobble uridines. Lack of such modifications affects protein synthesis due to inaccurate translation of mRNAs at ribosomes. We have discovered that integration of markers at the msh3 locus of Schizosaccharomyces pombe impaired the function of the nearby located dph3 gene. Such integrations rendered cells sensitive to the cytotoxic drugs hydroxyurea and methyl methanesulfonate. We constructed dph3 and msh3 strains with mutated ATG start codons (ATGmut), which allowed investigating drug sensitivity without potential interference by marker insertions. The dph3-ATGmut and a dph3::loxP-ura4-loxM gene disruption strain, but not msh3-ATGmut, turned out to be sensitive to hydroxyurea and methyl methanesulfonate, likewise the strains with cassettes integrated at the msh3 locus. The fungicide sordarin, which inhibits diphthamide modified eEF2 of Saccharomyces cerevisiae, barely affected survival of wild type and msh3Δ S. pombe cells, while the dph3Δ mutant was sensitive. The msh3-ATG mutation, but not dph3Δ or the dph3-ATG mutation caused a defect in mating-type switching, indicating that the ura4 marker at the dph3 locus did not interfere with Msh3 function. We conclude that Dph3 is required for cellular resistance to the fungicide sordarin and to the cytotoxic drugs hydroxyurea and methyl methanesulfonate. This is likely mediated by efficient translation of proteins in response to DNA damage and replication stress.

Indexed as

Gene Expression Regulation, FungalMutationCodon, InitiatorCytotoxinsGenetic EngineeringGenetic LociGenetic MarkersHistidineHydroxyureaIndenesMethyl MethanesulfonateMutS Homolog 3 ProteinPeptide Elongation Factor 2Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSchizosaccharomycesCodon, InitiatorCytotoxinsdiphthamideGenetic MarkersHistidineHydroxyureaIndenesMethyl MethanesulfonateMSH3 protein, S cerevisiaeMutS Homolog 3 ProteinPeptide Elongation Factor 2Saccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteinssordarinura4 protein, S pombeDNA damage responseElongatorGenome stabilitySordarinTranscriptional interferenceTranslation elongation factor eEF2tRNA modifications

Identifiers

PMID28555368
PMCPMC5668335
OpenAlexW2617513633

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.