Evidence map›Paper›PMID 28555196›Full record

ArticleBioMed research international2017

Exogenous Expressions of FTO Wild-Type and R316Q Mutant Proteins Caused an Increase in HNRPK Levels in 3T3-L1 Cells as Demonstrated by DIGE Analysis.

Nil Guzel, Murat Kasap, Aylin Kanli, Gurler Akpinar, M Dogan Gulkac, Kubra Karaosmanoglu

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nil GuzelDepartment of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.
Murat KasapDepartment of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.ORCID 0000-0001-8527-2096
Aylin KanliDepartment of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.ORCID 0000-0002-0674-0072
Gurler AkpinarDepartment of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.
M Dogan GulkacDepartment of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.
Kubra KaraosmanogluDepartment of Biomedical Engineering, Technology Faculty, Kocaeli University, Umuttepe, 41380 Kocaeli, Turkey.
Kocaeli Üniversitesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fat mass and obesity-associated protein is an enzyme that oxidatively demethylates DNA. Although there are numerous studies regarding the catalytic function of FTO, the overall existence or absence of FTO on cellular proteome has not been investigated. This study investigated the changes in the soluble proteome of 3T3-L1 cells upon expression of the WT and the mutant (R316Q) FTO proteins. Protein extracts prepared from 3T3-L1 cells expressing either the WT or the mutant FTO proteins were used in DIGE experiments. Analysis of the data revealed the number of spots matched to every member and there were 350 ± 20 spots with 30.5% overall mean coefficient of variation. Eleven regulated protein spots were excised from the gels and identified by MALDI-TOF/TOF. One of the identified proteins was heterogeneous nuclear ribonucleoprotein K, which displayed more than 2.6- and 3.7-fold increases in its abundance in the WT and the mutant FTO expressing cells, respectively. Western blot analysis validated these observations. This is the first study revealing the presence of a parallel increase in expressions of FTO and HNRNPK proteins. This increase may codictate the metabolic changes occurring in the cell and may attribute a significance to HNRNPK in FTO-associated transformations.

Indexed as

Gene Expression RegulationMutation, Missense3T3-L1 CellsAlpha-Ketoglutarate-Dependent Dioxygenase FTOAmino Acid SubstitutionAnimalsHeterogeneous-Nuclear Ribonucleoprotein KMiceSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAlpha-Ketoglutarate-Dependent Dioxygenase FTOFTO protein, mouseHeterogeneous-Nuclear Ribonucleoprotein K

Identifiers

PMID28555196
PMCPMC5438842
OpenAlexW2610185688

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.