ArticleBMC genomics2017
Association mapping of loci controlling genetic and environmental interaction of soybean flowering time under various photo-thermal conditions.
Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.
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Who cites it
40 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Advancing crop improvement through GWAS and beyond in mung bean.Frontiers in plant science · 2024Pooled it
- Natural variation in GmRVE4d facilitates soybean latitudinal adaptation by regulating GmPRR5a-dependent flowering and maturity.Nature communications · 2026Article
- A combination of QTL mapping and genome‑wide association study revealed the key gene for the growth period traits in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Identification of candidate loci regulating seed-associated traits in soybean using genome-wide association study and image-based high-throughput phenotyping.Frontiers in plant science · 2026Article
- A major FT/TFL1 regulatory locus (Frontiers in plant science · 2026Article
- Decades' progress and prospects on maize functional genomics and molecular breeding.Science China. Life sciences · 2025Review
- Genome-wide association analyses for revealing QTN, QTN-by-environment and QTN-by-QTN interactions in soybean phenology.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Development and validation of PCR marker array for molecular selection towards spring, vernalization-independent and winter, vernalization-responsive ecotypes of white lupin (Lupinus albus L.).Scientific reports · 2025Article
- Modelling the potential impact of climate change on the productivity of soybean in the Nigeria Savannas.PloS one · 2025Article
- Local haplotyping reveals insights into the genetic control of flowering time variation in wild and domesticated soybean.The plant genome · 2024Article
- The Effects of Different Durations of Night-Time Supplementary Lighting on the Growth, Yield, Quality and Economic Returns of Tomato.Plants (Basel, Switzerland) · 2024Article
- Flowering time regulator qFT13-3 involved in soybean adaptation to high latitudes.Plant biotechnology journal · 2024Article
- Common signatures of selection reveal target loci for breeding across soybean populations.The plant genome · 2024Article
- Genome-wide association study reveals GmFulb as candidate gene for maturity time and reproductive length in soybeans (Glycine max).PloS one · 2024Article
- Dissection of theFrontiers in plant science · 2024Article
- Molecular breeding for improvement of photothermal adaptability in soybean.Molecular breeding : new strategies in plant improvement · 2023Article
- Diverse flowering responses subjecting to ambient high temperature in soybean under short-day conditions.Plant biotechnology journal · 2023Article
- Focusing the GWAS Lens on days to flower using latent variable phenotypes derived from global multienvironment trials.The plant genome · 2023Article
- High-quality genome assembly and pan-genome studies facilitate genetic discovery in mung bean and its improvement.Plant communications · 2022Article
- Identification of Loci Governing Agronomic Traits and Mutation Hotspots via a GBS-Based Genome-Wide Association Study in a Soybean Mutant Diversity Pool.International journal of molecular sciences · 2022Article
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12 authors.
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Abstract
backgroundSoybean (Glycine max (L.) Merr.) is a short day plant. Its flowering and maturity time are controlled by genetic and environmental factors, as well the interaction between the two factors. Previous studies have shown that both genetic and environmental factors, mainly photoperiod and temperature, control flowering time of soybean. Additionally, these studies have reported gene × gene and gene × environment interactions on flowering time. However, the effects of quantitative trait loci (QTL) in response to photoperiod and temperature have not been well evaluated. The objectives of the current study were to identify the effects of loci associated with flowering time under different photo-thermal conditions and to understand the effects of interaction between loci and environment on soybean flowering.
methodsDifferent photoperiod and temperature combinations were obtained by adjusting sowing dates (spring sowing and summer sowing) or day-length (12 h, 16 h). Association mapping was performed on 91 soybean cultivars from different maturity groups (MG000-VIII) using 172 SSR markers and 5107 SNPs from the Illumina SoySNP6K iSelectBeadChip. The effects of the interaction between QTL and environments on flowering time were also analysed using the QTXNetwork.
resultsLarge-effect loci were detected on Gm 11, Gm 16 and Gm 20 as in previous reports. Most loci associated with flowering time are sensitive to photo-thermal conditions. Number of loci associated with flowering time was more under the long day (LD) than under the short day (SD) condition. The variation of flowering time among the soybean cultivars mostly resulted from the epistasis × environment and additive × environment interactions. Among the three candidate loci, i.e. Gm04_4497001 (near GmCOL3a), Gm16_30766209 (near GmFT2a and GmFT2b) and Gm19_47514601 (E3 or GmPhyA3), the Gm04_4497001 may be the key locus interacting with other loci for controlling soybean flowering time.
conclusionThe effects of loci associated with the flowering time of soybean were dependent upon the photo-thermal conditions. This study facilitates the understanding of the genetic mechanism of soybean flowering and molecular breeding for the improvement of soybean adaptability to specific and/or broad regions.
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