Evidence map›Paper›PMID 28549310›Full record

ArticleMedical image analysis2017

Segmentation of lumen and outer wall of abdominal aortic aneurysms from 3D black-blood MRI with a registration based geodesic active contour model.

Yan Wang, Florent Seguro, Evan Kao, Yue Zhang, Farshid Faraji, Chengcheng Zhu, Henrik Haraldsson, Michael Hope, David Saloner, Jing Liu

Abstract read
In one paragraph

Article in Medical image analysis, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  9. Surveillance of abdominal aortic aneurysm using accelerated 3D non-contrast black-blood cardiovascular magnetic resonance with compressed sensing (CS-DANTE-SPACE).Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance · 2019
    Article
  10. Article
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  14. Review
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  16. Automated segmentation of thoracic aortic lumen and vessel wall on three-dimensional bright- and black-blood magnetic resonance imaging using nnU-Net.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yan WangRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States. Electronic address: 612ywang@gmail.com.
Florent SeguroRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.
Evan KaoRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States; University of California, Berkeley; San Francisco, United States.
Yue ZhangVeterans Affairs Medical Center, San Francisco, United States.
Farshid FarajiRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.
Chengcheng ZhuRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.
Henrik HaraldssonRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.
Michael HopeRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.
David SalonerRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States; Veterans Affairs Medical Center, San Francisco, United States.
Jing LiuRadiology and Biomedical Imaging, University of California,San Francisco, San Francisco, United States.

Funding

MRI of Structure and Function in Assessing Hemodynamic Impact on AAA EvolutionR01HL114118 · NHLBI · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI SALONER, DAVID A · 2014 to 2017
$1.8M
Determinants of Intracranial Aneurysm GrowthR01NS059944 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SALONER, DAVID A · 2009 to 2013
$1.7M
Hemodynamic and inflammatory imaging in evaluation of abdominal aortic aneurysmsR01HL123759 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HOPE, MICHAEL DOUGLAS · 2015 to 2018
$1.6M
4D MRI Development for Cardiovascular ImagingK25EB014914 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIU, JING · 2012 to 2016
$842k
Comprehensive quantitative magnetic resonance imaging in assessment of aortic valve diseaseR56HL133663 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIU, JING · 2016 to 2016
$367k
NHLBI NIH HHS R01 HL114118NHLBI NIH HHS R01 HL123759NHLBI NIH HHS R56 HL133663NIBIB NIH HHS K25 EB014914NINDS NIH HHS R01 NS059944
6 · The paper itself

Abstract

Segmentation of the geometric morphology of abdominal aortic aneurysm is important for interventional planning. However, the segmentation of both the lumen and the outer wall of aneurysm in magnetic resonance (MR) image remains challenging. This study proposes a registration based segmentation methodology for efficiently segmenting MR images of abdominal aortic aneurysms. The proposed methodology first registers the contrast enhanced MR angiography (CE-MRA) and black-blood MR images, and then uses the Hough transform and geometric active contours to extract the vessel lumen by delineating the inner vessel wall directly from the CE-MRA. The proposed registration based geometric active contour is applied to black-blood MR images to generate the outer wall contour. The inner and outer vessel wall are then fused presenting the complete vessel lumen and wall segmentation. The results obtained from 19 cases showed that the proposed registration based geometric active contour model was efficient and comparable to manual segmentation and provided a high segmentation accuracy with an average Dice value reaching 89.79%.

Indexed as

AlgorithmsAortic Aneurysm, AbdominalHumansImaging, Three-DimensionalMagnetic Resonance ImagingReproducibility of ResultsAneurysm segmentationBlack-blood MRIGeodesic active contoursRegistration

Identifiers

PMID28549310
PMCPMC5796767

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.