Evidence map›Paper›PMID 28547727›Full record

ArticleWorld journal of microbiology & biotechnology2017

Isolation, purification and chemical characterization of a new angucyclinone compound produced by a new halotolerant Nocardiopsis sp. HR-4 strain.

Yamina Hadj Rabia-Boukhalfa, Yannick Eveno, Solange Karama, Okba Selama, Béatrice Lauga, Robert Duran, Hocine Hacène, Véronique Eparvier

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Rare HalophilicBioMed research international · 2023
    Article
  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yamina Hadj Rabia-BoukhalfaEquipe Microbiologie, Laboratoire de Biologie Cellulaire et Moléculaire, Faculté des Sciences Biologique-Université des Sciences et de la Technologie Houari Boumediene, BP 32, El Alia, 16111, Bab Ezzouar Alger, Algeria.
Yannick EvenoCNRS - Institut de Chimie des Substances Naturelles - Equipe Métabolites de Microorganismes Symbiotiques-Bioinspiration, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette, France.
Solange KaramaEquipe Environnement et Microbiologie, Institut Pluridisciplinaire de Recherche sur l'Environnement et les Matériaux, UMR 5254, Centre national de la recherche scientifique-Université de Pau et des Pays de l'Adour, Pau, France.
Okba SelamaEquipe Microbiologie, Laboratoire de Biologie Cellulaire et Moléculaire, Faculté des Sciences Biologique-Université des Sciences et de la Technologie Houari Boumediene, BP 32, El Alia, 16111, Bab Ezzouar Alger, Algeria.
Béatrice LaugaEquipe Environnement et Microbiologie, Institut Pluridisciplinaire de Recherche sur l'Environnement et les Matériaux, UMR 5254, Centre national de la recherche scientifique-Université de Pau et des Pays de l'Adour, Pau, France.
Robert DuranEquipe Environnement et Microbiologie, Institut Pluridisciplinaire de Recherche sur l'Environnement et les Matériaux, UMR 5254, Centre national de la recherche scientifique-Université de Pau et des Pays de l'Adour, Pau, France.
Hocine HacèneEquipe Microbiologie, Laboratoire de Biologie Cellulaire et Moléculaire, Faculté des Sciences Biologique-Université des Sciences et de la Technologie Houari Boumediene, BP 32, El Alia, 16111, Bab Ezzouar Alger, Algeria. h_hacene@yahoo.fr.
Véronique EparvierCNRS - Institut de Chimie des Substances Naturelles - Equipe Métabolites de Microorganismes Symbiotiques-Bioinspiration, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A halotolerant Actinobacteria strain HR-4 was isolated from a salt lake soil sample in Algerian Sahara. Analysis of 16S rDNA gene sequence showed that strain HR-4 belonged to the genus Nocardiopsis. The similarity level ranges between 97.45 and 99.20% with Nocardiopsis species and Nocardiopsis rosea being the most closely related one. Morphological, physiological and phylogenetic characteristics comparisons showed significant differences with the nearest species. These data strongly suggest that strain HR-4 represents novel species. The antimicrobial activity of strain HR-4 showed an antibacterial activity against Gram-positive bacteria as well as an antifungal one. Two major natural products including a new one were isolated from the culture broth using various separation and purification procedures. The chemical structure established on the basis of spectroscopic studies NMR and by comparing with spectroscopic data from the literature of the two compounds affirm that they are classified in the group of Angucyclinones. This is the first report of a production of this type of molecules by the genus Nocardiopsis. The new natural compound was established as (-)-7-deoxy-8-O-methyltetrangomycin with a new configuration.

Indexed as

Soil MicrobiologyActinobacteriaActinomycetalesAfrica, NorthernAlgeriaAngucyclines and AngucyclinonesAnthraquinonesAnti-Bacterial AgentsAntifungal AgentsBacterial Typing TechniquesDNA, BacterialDNA, RibosomalGenes, BacterialGram-Positive BacteriaPhylogenyRNA, Ribosomal, 16SAngucyclines and AngucyclinonesangucyclinoneAnthraquinonesAnti-Bacterial AgentsAntifungal AgentsDNA, BacterialDNA, RibosomalMM 47755RNA, Ribosomal, 16SAngucyclinoneAntimicrobial activityHalotolerantNocardiopsisTaxonomy

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.