Evidence map›Paper›PMID 28547376›Full record

ReviewEnvironmental science and pollution research international2018

Nonribosomal peptides and polyketides of Burkholderia: new compounds potentially implicated in biocontrol and pharmaceuticals.

Qassim Esmaeel, Maude Pupin, Philippe Jacques, Valérie Leclère

Abstract readReview
PubMed Publisher
In one paragraph

Review in Environmental science and pollution research international, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
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  6. Article
  7. The porcine skin microbiome exhibits broad fungal antagonism.Fungal genetics and biology : FG & B · 2024
    Article
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Review
  14. Discovery, mode of action and secretion ofCell surface (Amsterdam, Netherlands) · 2022
    Review
  15. Comparative genomics ofMicrobial genomics · 2022
    Article
  16. Review
  17. Article
  18. Review
  19. Metabolic Footprints ofMicroorganisms · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Qassim EsmaeelUniversity Lille, INRA, ISA, University Artois, University Littoral Côte d'Opale, EA 7394-ICV- Institut Charles Viollette, F-59000, Lille, France.
Maude PupinUniversity Lille, CNRS, Centrale Lille, UMR 9189- CRIStAL- Centre de Recherche en Informatique Signal et Automatique de Lille, F-59000, Lille, France.
Philippe JacquesUniversity Lille, INRA, ISA, University Artois, University Littoral Côte d'Opale, EA 7394-ICV- Institut Charles Viollette, F-59000, Lille, France.
Valérie LeclèreUniversity Lille, INRA, ISA, University Artois, University Littoral Côte d'Opale, EA 7394-ICV- Institut Charles Viollette, F-59000, Lille, France. valerie.leclere@univ-lille1.fr.
Institut Charles Viollette · FRÉcole Centrale de Lille · FRGembloux Agro-Bio Tech · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria belonging to the genus Burkholderia live in various ecological niches and present a significant role in the environments through the excretion of a wide variety of secondary metabolites including modular nonribosomal peptides (NRPs) and polyketides (PKs). These metabolites represent a widely distributed biomedically and biocontrol important class of natural products including antibiotics, siderophores, and anticancers as well as biopesticides that are considered as a novel source that can be used to defend ecological niche from competitors and to promote plant growth. The aim of this review is to present all NRPs produced or potentially produced by strains of Burkholderia, as NRPs represent a major source of active compounds implicated in biocontrol. The review is a compilation of results from a large screening we have performed on 48 complete sequenced genomes available in NCBI to identify NRPS gene clusters, and data found in the literature mainly because some interesting compounds are produced by strains not yet sequenced. In addition to NRPs, hybrids NRPs/PKs are also included. Specific features about biosynthetic gene clusters and structures of the modular enzymes responsible for the synthesis, the biological activities, and the potential uses in agriculture and pharmaceutical of NRPs and hybrids NRPs/PKs will also be discussed.

Indexed as

Biological Control AgentsBurkholderiaGenome, BacterialHumansPeptidesPolyketidesBiological Control AgentsPeptidesPolyketidesBiocontrolBurkholderiaHybrid NRPS/PKSLipopeptidesNRPSSiderophores

Identifiers

PMID28547376
OpenAlexW2619140044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.