Evidence map›Paper›PMID 28547210›Full record

ArticleJournal of mathematical biology2018

Greater accuracy and broadened applicability of phase reduction using isostable coordinates.

Dan Wilson, Bard Ermentrout

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of mathematical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Recent advances in coupled oscillator theory.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2019
    Article
  9. Nonlinear phase coupling functions: a numerical study.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2019
    Article
  10. Synchronization of Electrically Coupled Resonate-and-Fire Neurons.SIAM journal on applied dynamical systems · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Dan WilsonDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, 15213, USA. dan.d.wilson8@gmail.com.ORCID 0000-0003-1363-147X
Bard ErmentroutDepartment of Mathematics, University of Pittsburgh, Pittsburgh, PA, 15213, USA.

Funding

National Science Foundation NSF-1602841
6 · The paper itself

Abstract

The applicability of phase models is generally limited by the constraint that the dynamics of a perturbed oscillator must stay near its underlying periodic orbit. Consequently, external perturbations must be sufficiently weak so that these assumptions remain valid. Using the notion of isostables of periodic orbits to provide a simplified coordinate system from which to understand the dynamics transverse to a periodic orbit, we devise a strategy to correct for changing phase dynamics for locations away from the limit cycle. Consequently, these corrected phase dynamics allow for perturbations of larger magnitude without invalidating the underlying assumptions of the reduction. The proposed reduction strategy yields a closed set of equations and can be applied to periodic orbits embedded in arbitrarily high dimensional spaces. We illustrate the utility of this strategy in two models with biological relevance. In the first application, we find that an optimal control strategy for modifying the period of oscillation can be improved with the corrected phase reduction. In the second, the corrected phase reduced dynamics are used to understand adaptation and memory effects resulting from past perturbations.

Indexed as

Models, BiologicalNonlinear DynamicsAction PotentialsCircadian RhythmCLOCK ProteinsComputational BiologyHumansMathematical ConceptsMemoryModels, NeurologicalSystems BiologyCLOCK Proteins37MXX (Approximation Methods of Dynamical Systems)41AXX (Approximations and Expansions)49J15 (Optimal Control Problems Involving ODEs)92BXX (Mathematical Biology in General)

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.