Evidence map›Paper›PMID 28547179›Full record

ArticleOecologia2017

Telomere length measurement by qPCR in birds is affected by storage method of blood samples.

Sophie Reichert, Hannah Froy, Winnie Boner, Theresa M Burg, Francis Daunt, Robert Gillespie, Kate Griffiths, Sue Lewis, Richard A Phillips, Dan H Nussey and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Oecologia, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. The relationship between telomere length and mortality risk in non-model vertebrate systems: a meta-analysis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Pooled it
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  10. Establishment of an Efficient Immortalization Strategy Using HMEJ-Based bInternational journal of molecular sciences · 2021
    Article
  11. Do the telomere ends justify the physical means?Journal of the American Geriatrics Society · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Sophie ReichertDepartment of Animal and Plant Sciences, University of Sheffield, Sheffield, UK. reichert.sophie@gmail.com.ORCID 0000-0001-7151-2773
Hannah FroyInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK. hannah.froy@ed.ac.uk.
Winnie BonerInstitute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK.
Theresa M BurgDepartment of Biology, University of Lethbridge, Lethbridge, Canada.
Francis DauntCentre for Ecology and Hydrology, Edinburgh, UK.
Robert GillespieInstitute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK.
Kate GriffithsInstitute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK.
Sue LewisCentre for Ecology and Hydrology, Edinburgh, UK.
Richard A PhillipsBritish Antarctic Survey, High Cross, Cambridge, UK.
Dan H NusseyInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.
Pat MonaghanInstitute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow, UK.
University of Glasgow · GBBritish Antarctic Survey · GBUK Centre for Ecology & Hydrology · GBUniversity of Edinburgh · GBUniversity of Lethbridge · CA

Funding

Biotechnology and Biological Sciences Research Council BB/H021868/1
6 · The paper itself

Abstract

Given the potential role of telomeres as biomarkers of individual health and ageing, there is an increasing interest in studying telomere dynamics in a wider range of taxa in the fields of ecology and evolutionary biology. Measuring telomere length across the lifespan in wild animal systems is essential for testing these hypotheses, and may be aided by archived blood samples collected as part of longitudinal field studies. However, sample collection, storage, and DNA extraction methods may influence telomere length measurement, and it may, therefore, be difficult to balance consistency in sampling protocol with making the most of available samples. We used two complementary approaches to examine the impacts of sample storage method on measurements of relative telomere length (RTL) by qPCR, particularly focusing on FTA (Flinders Technology Associates) cards as a long-term storage solution. We used blood samples from wandering albatrosses collected over 14 years and stored in three different ways (n = 179), and also blood samples from captive zebra finches (n = 30) that were each stored using three different methods. Sample storage method influenced RTL in both studies, and samples on FTA cards had significantly shorter RTL measurements. There was no significant correlation between RTL measured in zebra finch blood on FTA cards and the same samples stored either as frozen whole blood or as extracted DNA. These results highlight the importance of consistency of sampling protocol, particularly in the context of long-term field studies, and suggest that FTA cards should not be used as a long-term storage solution to measure RTL without validation.

Indexed as

DNASpecimen HandlingTelomereAnimalsBirdsReal-Time Polymerase Chain ReactionDNAAgeingDNAFTA cardsLong-term field studyTelomeresWandering albatrossZebra finch

Identifiers

PMID28547179
PMCPMC5487852
OpenAlexW2616889529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.