Evidence map›Paper›PMID 28546547›Full record

ArticleScientific reports2017

Bioturbation as a key driver behind the dominance of Bacteria over Archaea in near-surface sediment.

Xihan Chen, Thorbjørn Joest Andersen, Yuki Morono, Fumio Inagaki, Bo Barker Jørgensen, Mark Alexander Lever

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Global diversity of microbial communities in marine sediment.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Macrofaunal control of microbial community structure in continental margin sediments.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. The Distribution ofFrontiers in microbiology · 2020
    Article
  15. Article
  16. Cryptic CHThe ISME journal · 2019
    Article
  17. Article
  18. How Low Can You Go: Methane Production ofFrontiers in bioengineering and biotechnology · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xihan ChenCenter for Geomicrobiology, Department of Bioscience, Aarhus University, 8000, Aarhus, Denmark.
Thorbjørn Joest AndersenDepartment of Geosciences and Natural Resource Management, University of Copenhagen, 1350, Copenhagen, Denmark.
Yuki MoronoKochi Institute for Core Sample Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Nankoku, Kochi, 783-8502, Japan.
Fumio InagakiKochi Institute for Core Sample Research, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Nankoku, Kochi, 783-8502, Japan.ORCID 0000-0003-2887-6525
Bo Barker JørgensenCenter for Geomicrobiology, Department of Bioscience, Aarhus University, 8000, Aarhus, Denmark.
Mark Alexander LeverCenter for Geomicrobiology, Department of Bioscience, Aarhus University, 8000, Aarhus, Denmark. mark.lever@usys.ethz.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The factors controlling the relative abundances of Archaea and Bacteria in marine sediments are poorly understood. We determined depth distributions of archaeal and bacterial 16S rRNA genes by quantitative PCR at eight stations in Aarhus Bay, Denmark. Bacterial outnumber archaeal genes 10-60-fold in uppermost sediments that are irrigated and mixed by macrofauna. This bioturbation is indicated by visual observations of sediment color and faunal tracks, by porewater profiles of dissolved inorganic carbon and sulfate, and by distributions of unsupported

Indexed as

BiodiversityArchaeaBacteriaDNA, ArchaealDNA, BacterialGeologic SedimentsPhylogenyPhylogeographyRNA, Ribosomal, 16SDNA, ArchaealDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID28546547
PMCPMC5445093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.