Evidence map›Paper›PMID 28546511›Full record

ArticleGenes & development2017

The NANCI-Nkx2.1 gene duplex buffers Nkx2.1 expression to maintain lung development and homeostasis.

Michael J Herriges, David J Tischfield, Zheng Cui, Michael P Morley, Yumiao Han, Apoorva Babu, Su Li, MinMin Lu, Isis Cendan, Benjamin A Garcia and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 39 citations in OpenAlex.

  1. Multimodal classification of neurons in the lateral septum.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
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  7. Long non-coding RNAs: novel regulators of cellular physiology and function.Pflugers Archiv : European journal of physiology · 2022
    Review
  8. Article
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  14. Consecutive Hypoxia Decreases Expression ofFrontiers in cell and developmental biology · 2020
    Article
  15. Transcriptional control of lung alveolar type 1 cell development and maintenance by NK homeobox 2-1.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Michael J HerrigesDepartment of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
David J TischfieldNeuroscience Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Zheng CuiDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Michael P MorleyDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Yumiao HanDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Apoorva BabuDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Su LiDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
MinMin LuDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Isis CendanDepartment of Psychiatry, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Benjamin A GarciaDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Stewart A AndersonNeuroscience Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Edward E MorriseyDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
University of Pennsylvania · USPhiladelphia University · USCalifornia Institute for Regenerative Medicine · US

Funding

Wnt signaling in the alveolar nicheR01HL087825 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2008 to 2021
$6.4M
Molecular pathways controlling alveolar epithelial remodeling in development and regenerationR01HL132999 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2016 to 2023
$4.6M
Epigenic Regulation of Lung Progenitor Repair and RegenerationU01HL110942 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2012 to 2016
$3.4M
Function of the IncRNA transcriptome in lung development and regenerationR01HL122993 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2015 to 2018
$2.5M
Developmental pathways regulating adult lung quiescenceR01HL132349 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2016 to 2019
$2.3M
Investigating the function and mechanism of NANCI activity during lung developmentF31HL129683 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI HERRIGES, MICHAEL J · 2015 to 2016
$64k
NHLBI NIH HHS F31 HL129683NHLBI NIH HHS R01 HL087825NHLBI NIH HHS R01 HL122993NHLBI NIH HHS R01 HL132349NHLBI NIH HHS R01 HL132999NHLBI NIH HHS U01 HL110942
6 · The paper itself

Abstract

A subset of long noncoding RNAs (lncRNAs) is spatially correlated with transcription factors (TFs) across the genome, but how these lncRNA-TF gene duplexes regulate tissue development and homeostasis is unclear. We identified a feedback loop within the NANCI (Nkx2.1-associated noncoding intergenic RNA)-Nkx2.1 gene duplex that is essential for buffering Nkx2.1 expression, lung epithelial cell identity, and tissue homeostasis. Within this locus, Nkx2.1 directly inhibits NANCI, while NANCI acts in

Indexed as

Gene Expression Regulation, DevelopmentalHomeostasisAnimalsEpithelial CellsHumansImmunity, CellularLungMiceNuclear ProteinsRNA, Long NoncodingThyroid Nuclear Factor 1Transcription FactorsNkx2-1 protein, mouseNuclear ProteinsRNA, Long NoncodingThyroid Nuclear Factor 1Transcription FactorsdevelopmentlncRNAslungtranscription factors

Identifiers

PMID28546511
PMCPMC5458756
OpenAlexW2617381634

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.