Evidence map›Paper›PMID 28546430›Full record

ArticleThe Journal of biological chemistry2017

Cross-talk between the H3K36me3 and H4K16ac histone epigenetic marks in DNA double-strand break repair.

Lin Li, Yinsheng Wang

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 86 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lin LiDepartment of Chemistry, University of California, Riverside, California 92521-0403.
Yinsheng WangDepartment of Chemistry, University of California, Riverside, California 92521-0403. Electronic address: Yinsheng.Wang@ucr.edu.
University of California, Riverside · US

Funding

Enzymatic Conversions of Tet-mediated Oxidation Products of 5-MethylcytosineR21ES025392 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2015 to 2016
$425k
NIEHS NIH HHS R21 ES025392
6 · The paper itself

Abstract

Post-translational modifications of histone proteins regulate numerous cellular processes. Among these modifications, trimethylation of lysine 36 in histone H3 (H3K36me3) and acetylation of lysine 16 in histone H4 (H4K16ac) have important roles in transcriptional regulation and DNA damage response signaling. However, whether these two epigenetic histone marks are mechanistically linked remains unclear. Here we discovered a new pathway through which H3K36me3 stimulates H4K16ac upon DNA double-strand break (DSB) induction in human cells. In particular, we examined, using Western blot analysis, the levels of H3K36me3 and H4K16ac in cells after exposure to various DSB-inducing agents, including neocarzinostatin, γ rays, and etoposide, and found that H3K36me3 and H4K16ac were both elevated in cells upon these treatments. We also observed that DSB-induced H4K16 acetylation was abolished in cells upon depletion of the histone methyltransferase gene SET-domain containing 2 (

Indexed as

DNA RepairEpigenesis, GeneticProtein Processing, Post-TranslationalAcetylationAdaptor Proteins, Signal TransducingBiomarkersCell Line, TumorChromatinCRISPR-Cas SystemsDNADNA Breaks, Double-StrandedGene Knockout TechniquesHEK293 CellsHistone AcetyltransferasesHistone-Lysine N-MethyltransferaseHistonesAdaptor Proteins, Signal TransducingBiomarkersChromatinDNAHistone AcetyltransferasesHistone-Lysine N-MethyltransferaseHistonesKAT5 protein, humanLysineLysine Acetyltransferase 5PSIP1 protein, humanRecombinant ProteinsSETD2 protein, humanTranscription FactorsDNA repairepigeneticshistone acetylationhistone methylationposttranslational modification (PTM)

Identifiers

PMID28546430
PMCPMC5512086
OpenAlexW2618807644

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.