Evidence map›Paper›PMID 28546213›Full record

ArticleScience (New York, N.Y.)2017

Tudor-SN-mediated endonucleolytic decay of human cell microRNAs promotes G

Reyad A Elbarbary, Keita Miyoshi, Jason R Myers, Peicheng Du, John M Ashton, Bin Tian, Lynne E Maquat

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. The biogenesis and regulation of animal microRNAs.Nature reviews. Molecular cell biology · 2025
    Review
  6. Review
  7. Review
  8. Review
  9. Nuclear AGO2 promotes myocardial remodeling by activating ANKRD1 transcription in failing hearts.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. The important role of miR-1-3p in cancers.Journal of translational medicine · 2023
    Review
  17. Article
  18. The Roles of microRNAs in the Cardiovascular System.International journal of molecular sciences · 2023
    Review
  19. Article
  20. A Compilation of the Diverse miRNA Functions inInternational journal of molecular sciences · 2023
    Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Reyad A ElbarbaryDepartment of Biochemistry and Biophysics, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642, USA.ORCID 0000-0002-1006-6877
Keita MiyoshiDepartment of Biochemistry and Biophysics, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642, USA.ORCID 0000-0001-7192-732X
Jason R MyersGenomics Research Center, University of Rochester, Rochester, NY 14642, USA.ORCID 0000-0002-0341-0860
Peicheng DuOffice of Advanced Research Computing, Rutgers University, Piscataway, NJ 08854, USA.ORCID 0000-0003-4367-0875
John M AshtonGenomics Research Center, University of Rochester, Rochester, NY 14642, USA.ORCID 0000-0001-9875-5994
Bin TianDepartment of Microbiology, Biochemistry, and Molecular Genetics, Rutgers New Jersey Medical School, Newark, NJ 07103, USA.ORCID 0000-0001-8903-8256
Lynne E MaquatDepartment of Biochemistry and Biophysics, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642, USA. lynne_maquat@urmc.rochester.edu.ORCID 0000-0001-7192-732X
University of Rochester · USRutgers, The State University of New Jersey · US

Funding

Regulation of Alternative Cleavage and PolyadenylationR01GM084089 · NIGMS · WISTAR INSTITUTE · PI TIAN, BIN · 2008 to 2023
$6.7M
Regulation of Normal and Defective Human GenesR37GM074593 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2014 to 2023
$4.8M
The University of Rochester Core Center for Musculoskeletal Biology and MedicineP30AR061307 · NIAMS · UNIVERSITY OF ROCHESTER · PI SCHWARZ, EDWARD M. · 2011 to 2015
$3.0M
Illumina NextSeq500 DNA Sequencing SystemS10OD018206 · OD · RBHS-NEW JERSEY MEDICAL SCHOOL · PI TIAN, BIN · 2015 to 2015
$227k
Acquisition of a Typhoon FLA 9500 Laser Scanning ImagerS10OD021489 · OD · UNIVERSITY OF ROCHESTER · PI BUTLER, JAMES SCOTT · 2017 to 2017
$130k
NIAMS NIH HHS P30 AR061307NIGMS NIH HHS R01 GM084089NIGMS NIH HHS R37 GM074593NIH HHS S10 OD018206NIH HHS S10 OD021489
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression. The pathways that mediate mature miRNA decay are less well understood than those that mediate miRNA biogenesis. We found that functional miRNAs are degraded in human cells by the endonuclease Tudor-SN (TSN). In vitro, recombinant TSN initiated the decay of both protein-free and Argonaute 2-loaded miRNAs via endonucleolytic cleavage at CA and UA dinucleotides, preferentially at scissile bonds located more than five nucleotides away from miRNA ends. Cellular targets of TSN-mediated decay defined using microRNA sequencing followed this rule. Inhibiting TSN-mediated miRNA decay by CRISPR-Cas9 knockout of TSN inhibited cell cycle progression by up-regulating a cohort of miRNAs that down-regulates mRNAs that encode proteins critical for the G

Indexed as

G1 PhaseRNA StabilityS PhaseArgonaute ProteinsEndonucleasesHEK293 CellsHumansMicroRNAsNuclear ProteinsRNA-Induced Silencing ComplexAGO2 protein, humanArgonaute ProteinsEndonucleasesMicroRNAsNuclear ProteinsRNA-Induced Silencing ComplexSND1 protein, human

Identifiers

PMID28546213
PMCPMC5551500
OpenAlexW2619678069

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.