Evidence map›Paper›PMID 28545071›Full record

ArticlePloS one2017

Characterization of the urinary microbiome in healthy dogs.

Erin N Burton, Leah A Cohn, Carol N Reinero, Hans Rindt, Stephen G Moore, Aaron C Ericsson

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 69 citations in OpenAlex.

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  11. Subclinical bacteriuria and surgical-site infection in 140 dogs with orthopedic and neurological conditions.The Canadian veterinary journal = La revue veterinaire canadienne · 2024
    Article
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  15. Association ofPathogens (Basel, Switzerland) · 2024
    Article
  16. Identification of bacteria associated with canine otitis externa based on 16S rDNA high-throughput sequencing.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  17. Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Erin N BurtonDepartment of Veterinary Pathobiology, University of Missouri College of Veterinary Medicine, Columbia, Missouri, United States of America.ORCID http://orcid.org/0000-0001-9364-3205
Leah A CohnDepartment of Veterinary Medicine and Surgery, University of Missouri College of Veterinary Medicine, Columbia, Missouri, United States of America.
Carol N ReineroDepartment of Veterinary Medicine and Surgery, University of Missouri College of Veterinary Medicine, Columbia, Missouri, United States of America.
Hans RindtDepartment of Veterinary Medicine and Surgery, University of Missouri College of Veterinary Medicine, Columbia, Missouri, United States of America.
Stephen G MooreDivision of Animal Sciences, University of Missouri College of Agriculture, Food and Natural Resources, Columbia, Missouri, United States of America.
Aaron C EricssonDepartment of Veterinary Pathobiology, University of Missouri College of Veterinary Medicine, Columbia, Missouri, United States of America.
Missouri College · US

Funding

Impact of gut microbiota and segmented filamentous bacteria on colitis-associated colorectal cancerK01OD019924 · OD · UNIVERSITY OF MISSOURI-COLUMBIA · PI ERICSSON, AARON · 2016 to 2020
$573k
NIH HHS K01 OD019924
6 · The paper itself

Abstract

The urinary bladder in healthy dogs has dogmatically been considered free of bacteria. This study used culture independent techniques to characterize the healthy canine urinary microbiota. Urine samples collected by antepubic cystocentesis from dogs without urinary infection were used for DNA extraction. Genital tract and rectal samples were collected simultaneously from the same dogs. The V4 hypervariable region of the 16S rRNA bacterial gene was amplified and compared against Greengenes database for OTU assignment and relative abundance for urine, genital, and rectal samples. After excluding 4 dogs with cultivable bacteria, samples from 10 male (M; 1 intact) and 10 female (F) spayed dogs remained. All samples provided adequate genetic material for analysis. Four taxa (Pseudomonas sp., Acinetobacter sp., Sphingobium sp. and Bradyrhizobiaceae) dominated the urinary microbiota in all dogs of both sexes. These taxa were also detected in the genital swabs of both sexes, while the rectal microbiota differed substantially from the other sample sites. Principal component (PC) analysis of PC1 through PC3 showed overlap of urinary and genital microbiota and a clear separation of rectal swabs from the other sample sites along PC1, which explained 44.94% variation. Surprisingly, the urinary microbiota (mean # OTU 92.6 F, 90.2 M) was significantly richer than the genital (67.8 F, 66.6 M) or rectal microbiota (68.3 F, 71.2 M) (p < 0.0001), with no difference between sexes at any sample site. The canine urinary bladder is not a sterile environment and possesses its own unique and diverse microbiota compared to the rectal and genital microbiota. There was no difference between the sexes at any microbiota sample site (urine, genital, and rectal). The predominant bacterial genus for either sex in the urine and genital tracts was Pseudomonas sp.

Indexed as

AnimalsBacteriaDogsFemaleGenitaliaMaleOrgan SpecificityPrincipal Component AnalysisPseudomonasRectumRNA, Ribosomal, 16SSequence Analysis, RNAUrinary TractRNA, Ribosomal, 16S

Identifiers

PMID28545071
PMCPMC5435306
OpenAlexW2615034939

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.