ArticleMicrobiologyOpen2017
Metagenomic potential for and diversity of N-cycle driving microorganisms in the Bothnian Sea sediment.
Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Electrogenic CH4 oxidation on a bioanode: putative extracellular electron transport system in Methylobacter sp.FEMS microbiology ecology · 2026Article
- GCompip: a pipeline for estimating the gene abundance in microbial communities.Bioinformatics advances · 2025Article
- Biodiversity of microorganisms in the Baltic Sea: the power of novel methods in the identification of marine microbes.FEMS microbiology reviews · 2024Review
- Spatial co-occurrence patterns of benthic microbial assemblage in response to trace metals in the Atacama Desert Coastline.Frontiers in microbiology · 2022Article
- Metagenomics of Antarctic Marine Sediment Reveals Potential for Diverse Chemolithoautotrophy.mSphere · 2021Article
- 309 metagenome assembled microbial genomes from deep sediment samples in the Gulfs of Kathiawar Peninsula.Scientific data · 2021Article
- Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen-limited methane- and iron-fed bioreactor inoculated with Bothnian Sea sediments.MicrobiologyOpen · 2021Article
- Anthropogenic and Environmental Constraints on the Microbial Methane Cycle in Coastal Sediments.Frontiers in microbiology · 2021Review
- Metagenomic Insight Into Patterns and Mechanism of Nitrogen Cycle During Biocrust Succession.Frontiers in microbiology · 2021Article
- Metagenomic analysis of nitrogen-cycling genes in upper Mississippi river sediment with mussel assemblages.MicrobiologyOpen · 2019Article
- Eelgrass Sediment Microbiome as a Nitrous Oxide Sink in Brackish Lake Akkeshi, Japan.Microbes and environments · 2019Article
- Oil degradation potential of microbial communities in water and sediment of Baltic Sea coastal area.PloS one · 2019Article
- Searching for signatures across microbial communities: Metagenomic analysis of soil samples from mangrove and other ecosystems.Scientific reports · 2017Article
- Metagenomic potential for and diversity of N-cycle driving microorganisms in the Bothnian Sea sediment.MicrobiologyOpen · 2017Article
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Authors and funding
4 authors.
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Abstract
The biological nitrogen cycle is driven by a plethora of reactions transforming nitrogen compounds between various redox states. Here, we investigated the metagenomic potential for nitrogen cycle of the in situ microbial community in an oligotrophic, brackish environment of the Bothnian Sea sediment. Total DNA from three sediment depths was isolated and sequenced. The characterization of the total community was performed based on 16S rRNA gene inventory using SILVA database as reference. The diversity of diagnostic functional genes coding for nitrate reductases (napA;narG), nitrite:nitrate oxidoreductase (nxrA), nitrite reductases (nirK;nirS;nrfA), nitric oxide reductase (nor), nitrous oxide reductase (nosZ), hydrazine synthase (hzsA), ammonia monooxygenase (amoA), hydroxylamine oxidoreductase (hao), and nitrogenase (nifH) was analyzed by blastx against curated reference databases. In addition, Polymerase chain reaction (PCR)-based amplification was performed on the hzsA gene of anammox bacteria. Our results reveal high genomic potential for full denitrification to N
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