Evidence map›Paper›PMID 28542262›Full record

ArticlePloS one2017

The role of the innate immune response regulatory gene ABCF1 in mammalian embryogenesis and development.

Sara M Wilcox, Hitesh Arora, Lonna Munro, Jian Xin, Franz Fenninger, Laura A Johnson, Cheryl G Pfeifer, Kyung Bok Choi, Juan Hou, Pamela A Hoodless and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Long noncoding RNAMolecular therapy. Nucleic acids · 2021
    Article
  12. Review
  13. Review
  14. ABCF1 Regulates dsDNA-induced Immune Responses in Human Airway Epithelial Cells.Frontiers in cellular and infection microbiology · 2020
    Article
  15. Zika Infection Disrupts Proteins Involved in the Neurosensory System.Frontiers in cell and developmental biology · 2020
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Sara M WilcoxThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.ORCID http://orcid.org/0000-0002-1635-1134
Hitesh AroraThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Lonna MunroThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Jian XinThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Franz FenningerThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Laura A JohnsonThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Cheryl G PfeiferThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Kyung Bok ChoiThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
Juan HouTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia, Canada.
Pamela A HoodlessTerry Fox Laboratory, BC Cancer Agency, Vancouver, British Columbia, Canada.
Wilfred A JefferiesThe Michael Smith Laboratories, The University of British Columbia, Vancouver, British Columbia, Canada.
University of British Columbia · CABC Cancer Agency · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ABCF1 is an ABC transporter family protein that has been shown to regulate innate immune response and is a risk gene for autoimmune pancreatitis and arthritis. Unlike other members of ABC transporter family, ABCF1 lacks trans-membrane domains and is thought to function in translation initiation through an interaction with eukaryotic translation initiation factor 2 (eIF2). To study ABCF1 expression and function in development and disease, we used a single gene trap insertion in the Abcf1 gene in murine embryonic stem cells (ES cells) that allowed lineage tracing of the endogenous Abcf1 promoter by following the expression of a β-galactosidase reporter gene. From the ES cells, heterozygous mice (Abcf1+/-) were produced. No live born Abcf1-/- progeny were ever generated, and the lethality was not mouse strain-specific. Thus, we have determined that Abcf1 is an essential gene in development. Abcf1-/- mice were found to be embryonic lethal at 3.5 days post coitum (dpc), while Abcf1+/- mice appeared developmentally normal. Abcf1+/- mice were fertile and showed no significant differences in their anatomy when compared with their wild type littermates. The Abcf1 promoter was found to be active in all organs in adult mice, but varies in levels of expression in specific cell types within tissues. Furthermore, we observed high promoter activity in the blastocysts and embryos. Overall, Abcf1 expression in embryos is required for development and its expression in adults was highly correlated with actively proliferating and differentiating cell types.

Indexed as

Embryonic DevelopmentImmunity, InnateAnimalsATP-Binding Cassette TransportersCell DifferentiationCell LineCell ProliferationEmbryo, MammalianGene Expression Regulation, DevelopmentalGene Knockout TechniquesMicePromoter Regions, GeneticABCF1 protein, mouseATP-Binding Cassette Transporters

Identifiers

PMID28542262
PMCPMC5438103
OpenAlexW2619755875

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.