Evidence map›Paper›PMID 28541643›Full record

ArticleJournal of gynecologic oncology2017

Genotype-specific methylation of HPV in cervical intraepithelial neoplasia.

Yaw Wen Hsu, Rui Lan Huang, Po Hsuan Su, Yu Chih Chen, Hui Chen Wang, Chi Chun Liao, Hung Cheng Lai

Open access · diamondAbstract read
In one paragraph

Article in Journal of gynecologic oncology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Methylation ofWorld journal of oncology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Epigenetic approaches for cervical neoplasia screening (Review).Experimental and therapeutic medicine · 2021
    Review
  10. Article
  11. Genetic and Epigenetic Variations of HPV52 in Cervical Precancer.International journal of molecular sciences · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Yaw Wen HsuGraduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan.ORCID https://orcid.org/0000-0002-7414-6358
Rui Lan HuangDepartment of Obstetrics and Gynecology, Shuang Ho Hospital, Taipei Medical University, New Taipei, Taiwan.ORCID https://orcid.org/0000-0001-6458-4672
Po Hsuan SuDepartment of Obstetrics and Gynecology, Shuang Ho Hospital, Taipei Medical University, New Taipei, Taiwan.ORCID https://orcid.org/0000-0003-1114-6382
Yu Chih ChenDivision of Research and Analysis, Food and Drug Administration, Ministry of Health and Welfare, Taipei, Taiwan.ORCID https://orcid.org/0000-0002-5721-2317
Hui Chen WangDepartment of Obstetrics and Gynecology, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.ORCID https://orcid.org/0000-0002-7514-0126
Chi Chun LiaoDepartment of Obstetrics and Gynecology, Shuang Ho Hospital, Taipei Medical University, New Taipei, Taiwan.ORCID https://orcid.org/0000-0003-4185-6254
Hung Cheng LaiGraduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan.ORCID https://orcid.org/0000-0001-8048-3943
Taipei Medical University-Shuang Ho Hospital · TWCentral South University · CNMinistry of Health and Welfare · TWNational Defense Medical Center · TWTaipei Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveHypermethylation of human papillomavirus (HPV) and host genes has been reported in cervical cancer. However, the degree of methylation of different HPV types relative to the severity of the cervical lesions remains controversial. Studies of the degree of methylation associated with the host gene and the HPV genome to the severity of cervical lesions are rare. We examined the association of methylation status between host genes and late gene 1 (L1) regions of HPV16, 18, 52, and 58 in cervical brushings.

methodsCervical brushings from 147 HPV-infected patients were obtained. The samples comprised normal (n=28), cervical intraepithelial neoplasia (CIN) 1 (n=45), CIN2 (n=13), and CIN3/carcinoma in situ (n=61). The methylation status of HPV and host genes was measured using bisulfite pyrosequencing and quantitative methylation-specific polymerase chain reaction (PCR).

resultsThe degree of methylation of L1 in HPV16, 18, and 52 was associated with the severity of the cervical lesion. In HPV52, C-phosphate-G (CpG) sites 6368m, 6405m, and 6443m showed significantly higher methylation in lesions ≥CIN3 (p=0.005, 0.003, and 0.026, respectively). Methylation of most HPV types except HPV52 (r<-0.1) was positively correlated with the degree of methylation of host genes including PAX1 and SOX1 (0.4≤r≤0.7). Combining HPV methylation with PAX1 methylation improved the clustering for ≥CIN2.

conclusionOur study showed that the degree of L1 methylation of HPV16, 18, and 52 but not 58 is associated with the severity of cervical lesions. The association between HPV methylation and host gene methylation suggests different responses of host cellular epigenetic machinery to different HPV genotypes.

Indexed as

DNA MethylationAlphapapillomavirusBiomarkers, TumorCpG IslandsDNA, ViralEarly Detection of CancerEpigenesis, GeneticFemaleGenotypeHuman papillomavirus 16Human papillomavirus 18Human Papillomavirus DNA TestsHumansPaired Box Transcription FactorsPapillomavirus InfectionsROC CurveBiomarkers, TumorDNA, ViralPaired Box Transcription FactorsPAX1 transcription factorSOX1 protein, humanSOXB1 Transcription FactorsCervical Intraepithelial NeoplasiaDNA MethylationHuman Papilloma VirusHuman Papillomavirus 16MethylationPAX1 Transcription FactorViruses

Identifiers

PMID28541643
PMCPMC5447154
OpenAlexW2616056016

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.