Evidence map›Paper›PMID 28541563›Full record

ArticleNucleic acids research2017

The double-stranded RNA binding protein RDE-4 can act cell autonomously during feeding RNAi in C. elegans.

Pravrutha Raman, Soriayah M Zaghab, Edward C Traver, Antony M Jose

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

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  9. Regulatory RNAs: A Universal Language for Inter-Domain Communication.International journal of molecular sciences · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Pravrutha RamanDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.
Soriayah M ZaghabDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.
Edward C TraverDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.
Antony M JoseDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.
University of Maryland, College Park · US

Funding

Movement of RNA between animal cellsR01GM111457 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI JOSE, ANTONY MERLIN · 2014 to 2018
$1.4M
NIGMS NIH HHS R01 GM111457
6 · The paper itself

Abstract

Long double-stranded RNA (dsRNA) can silence genes of matching sequence upon ingestion in many invertebrates and is therefore being developed as a pesticide. Such feeding RNA interference (RNAi) is best understood in the worm Caenorhabditis elegans, where the dsRNA-binding protein RDE-4 initiates silencing by recruiting an endonuclease to process long dsRNA into short dsRNA. These short dsRNAs are thought to move between cells because muscle-specific rescue of rde-4 using repetitive transgenes enables silencing in other tissues. Here, we extend this observation using additional promoters, report an inhibitory effect of repetitive transgenes, and discover conditions for cell-autonomous silencing in animals with tissue-specific rescue of rde-4. While expression of rde-4(+) in intestine, hypodermis, or neurons using a repetitive transgene can enable silencing also in unrescued tissues, silencing can be inhibited wihin tissues that express a repetitive transgene. Single-copy transgenes that express rde-4(+) in body-wall muscles or hypodermis, however, enable silencing selectively in the rescued tissue but not in other tissues. These results suggest that silencing by the movement of short dsRNA between cells is not an obligatory feature of feeding RNAi in C. elegans. We speculate that similar control of dsRNA movement could modulate tissue-specific silencing by feeding RNAi in other invertebrates.

Indexed as

RNA InterferenceAnimalsAnimals, Genetically ModifiedCaenorhabditis elegans ProteinsGene Expression RegulationMembrane ProteinsMutationPromoter Regions, GeneticRNA-Binding ProteinsRNA, Double-StrandedRNA, HelminthTransgenesCaenorhabditis elegans ProteinsMembrane ProteinsRDE-4 protein, C elegansRNA-Binding ProteinsRNA, Double-StrandedRNA, HelminthSID-1 protein, C elegans

Identifiers

PMID28541563
PMCPMC5737277
OpenAlexW2617458676

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.