Evidence map›Paper›PMID 28537542›Full record

ArticleMicrobiology (Reading, England)2017

Malonate degradation in

Julie L Stoudenmire, Alicia L Schmidt, Melissa P Tumen-Velasquez, Kathryn T Elliott, Nicole S Laniohan, S Walker Whitley, Nickolaus R Galloway, Melesse Nune, Michael West, Cory Momany and 2 more

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Metabolic engineering ofMetabolic engineering communications · 2024
    Article
  2. Regulation of tricarboxylate transport and metabolism inApplied and environmental microbiology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Accelerating pathway evolution by increasing the gene dosage of chromosomal segments.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Julie L StoudenmireDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Alicia L SchmidtDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Melissa P Tumen-VelasquezDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Kathryn T ElliottDepartment of Biology, The College of New Jersey, Ewing, NJ, USA.
Nicole S LaniohanDepartment of Microbiology, University of Georgia, Athens, GA, USA.
S Walker WhitleyDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Nickolaus R GallowayDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Melesse NuneDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, Athens, GA, USA.
Michael WestDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, Athens, GA, USA.
Cory MomanyDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, Athens, GA, USA.
Ellen L NeidleDepartment of Microbiology, University of Georgia, Athens, GA, USA.
Anna C KarlsDepartment of Microbiology, University of Georgia, Athens, GA, USA.
University of Georgia · USCollege of New Jersey · US

Funding

PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
NIGMS NIH HHS T32 GM008403
6 · The paper itself

Abstract

Transcriptional regulators in the LysR or GntR families are typically encoded in the genomic neighbourhood of bacterial genes for malonate degradation. While these arrangements have been evaluated using bioinformatics methods, experimental studies demonstrating co-transcription of predicted operons were lacking. Here, transcriptional regulation was characterized for a cluster of

Indexed as

gene amplificationLysRmalonatemultiple promotersoperon structure

Identifiers

PMID28537542
PMCPMC7008218
OpenAlexW2616963827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.