Evidence map›Paper›PMID 28537254›Full record

SynthesisNature communications2017

Large scale meta-analysis characterizes genetic architecture for common psoriasis associated variants.

Lam C Tsoi, Philip E Stuart, Chao Tian, Johann E Gudjonsson, Sayantan Das, Matthew Zawistowski, Eva Ellinghaus, Jonathan N Barker, Vinod Chandran, Nick Dand and 27 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 206 papers, 16 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
206citing papers in PubMed, 16 pooled it
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

206 citing papers in PubMed, 16 syntheses or guidelines pooled it, 390 citations in OpenAlex.

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146 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors at 16 institutions in 7 countries.

Lam C TsoiDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Philip E StuartDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Chao Tian23andMe, Inc., Mountain View, California 94041, USA.
Johann E GudjonssonDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Sayantan DasDepartment of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.ORCID 0000-0001-6346-1590
Matthew ZawistowskiDepartment of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.ORCID 0000-0002-3005-083X
Eva EllinghausInstitute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.ORCID 0000-0003-2914-3382
Jonathan N BarkerSt John's Institute of Dermatology, Division of Genetics and Molecular Medicine, Faculty of Life Sciences and Medicine, King's College London, London SE1 9RT, UK.
Vinod ChandranDepartment of Medicine, Division of Rheumatology, University of Toronto, Toronto, Ontario, Canada M5S 1A8.
Nick DandSt John's Institute of Dermatology, Division of Genetics and Molecular Medicine, Faculty of Life Sciences and Medicine, King's College London, London SE1 9RT, UK.ORCID 0000-0002-1805-6278
Kristina Callis DuffinDepartment of Dermatology, University of Utah, Salt Lake City, Utah 84132, USA.
Charlotta EnerbäckDepartment of Dermatology, Linköping University, Linköping SE-581 83, Sweden.
Tõnu EskoEstonian Genome Center, University of Tartu, Tartu 51010, Estonia.
Andre FrankeInstitute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.ORCID 0000-0003-1530-5811
Dafna D GladmanDepartment of Medicine, Division of Rheumatology, University of Toronto, Toronto, Ontario, Canada M5S 1A8.
Per HoffmannInstitute of Human Genetics, University of Bonn, Bonn 53127, Germany.
Külli KingoDermatology Clinic, Tartu University Hospital, Department of Dermatology and Venereology, University of Tartu, Tartu 50417, Estonia.
Sulev KõksDepartment of Pathophysiology, Centre of Translational Medicine and Centre for Translational Genomics, University of Tartu, Tartu 50411, Estonia.
Gerald G KruegerDepartment of Dermatology, University of Utah, Salt Lake City, Utah 84132, USA.
Henry W LimDepartment of Dermatology, Henry Ford Hospital, Detroit, Michigan 48202, USA.
Andres MetspaluEstonian Genome Center, University of Tartu, Tartu 51010, Estonia.
Ulrich MrowietzDepartment of Dermatology, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel 24105, Germany.
Sören MuchaInstitute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.
Proton RahmanMemorial University, St. John's, Newfoundland, Newfoundland and Labrador, Canada A1B 3X9.
Andre ReisInstitute of Human Genetics, FAU Erlangen-Nürnberg, Erlangen 91054, Germany.ORCID 0000-0002-6301-6363
Trilokraj TejasviDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Richard TrembathDepartment of Medical and Molecular Genetics, King's College London, London WC2R 2LS, UK.
John J VoorheesDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Stephan WeidingerDepartment of Dermatology, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel 24105, Germany.
Michael WeichenthalDepartment of Dermatology, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel 24105, Germany.ORCID 0000-0002-9060-4961
Xiaoquan WenDepartment of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
Nicholas Eriksson23andMe, Inc., Mountain View, California 94041, USA.
Hyun M KangDepartment of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
David A Hinds23andMe, Inc., Mountain View, California 94041, USA.
Rajan P NairDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Gonçalo R AbecasisDepartment of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
James T ElderDepartment of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
University of Michigan · US23andMe (United States) · USChristian-Albrechts-Universität zu Kiel · DEClinical Research Center Kiel · DEKing's College London · GBUniversity of Toronto · CAUniversity of Utah · USBroad Institute · USEstonian University of Life Sciences · EEFriedrich-Alexander-Universität Erlangen-Nürnberg · DEHenry Ford Hospital · USLinköping University · SEMemorial University of Newfoundland · CATartu University Hospital · EEUniversity of Bonn · DEUniversity of Tartu · EE

Funding

ZINC GLUCONATE GLYCINE LOZENGES &VITAMIN C EFFECTS ON COMMON COLDM01RR000042 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELSTROM, REBECCA L · 1985 to 2007
$40.8M
Linkage analysis of familial psoriasis(Supplement)R01AR042742 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 1994 to 2021
$10.1M
Genetic and Genomic Dissection of Psoriatic ArthritisR01AR063611 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD, GLADMAN, DAFNA D · 2012 to 2023
$6.2M
Identification of Psoriatic Arthritis Genes in the MHCR01AR050511 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2004 to 2013
$4.2M
Combined Analysis of Gene Expression and DNA Variation in PsoriasisR01AR054966 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2007 to 2011
$3.2M
Functional Genomics of PsoriasisR01AR065183 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2013 to 2016
$1.7M
Development of a web-based database and research engine for genetic discoveryR44HG006981 · NHGRI · 23ANDME, INC. · PI MOUNTAIN, JOANNA L. · 2013 to 2014
$1.4M
Genotyping the NPF Biobank for Psoriasis Susceptibility GenesRC1AR058315 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2009 to 2010
$993k
Role of the Psoriasis Associated IL23R Risk Variants on Th17 Biology and FunctionK08AR060802 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GUDJONSSON, JOHANN ELI · 2011 to 2015
$636k
Design Approaches for Sequencing Disease-Associated Regions in PsoriasisU01HG005924 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2010 to 2010
$221k
Medical Research Council MR/L011808/1NCRR NIH HHS M01 RR000042NHGRI NIH HHS R44 HG006981NHGRI NIH HHS U01 HG005924NIAMS NIH HHS K08 AR060802NIAMS NIH HHS R01 AR042742NIAMS NIH HHS R01 AR050511NIAMS NIH HHS R01 AR054966NIAMS NIH HHS R01 AR063611NIAMS NIH HHS R01 AR065183NIAMS NIH HHS RC1 AR058315Wellcome Trust
6 · The paper itself

Abstract

Psoriasis is a complex disease of skin with a prevalence of about 2%. We conducted the largest meta-analysis of genome-wide association studies (GWAS) for psoriasis to date, including data from eight different Caucasian cohorts, with a combined effective sample size >39,000 individuals. We identified 16 additional psoriasis susceptibility loci achieving genome-wide significance, increasing the number of identified loci to 63 for European-origin individuals. Functional analysis highlighted the roles of interferon signalling and the NFκB cascade, and we showed that the psoriasis signals are enriched in regulatory elements from different T cells (CD8

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAge of OnsetGene Regulatory NetworksGenetic LociHumansInterferonsNF-kappa BPolymorphism, Single NucleotideProtein Interaction MapsPsoriasisSignal TransductionT-LymphocytesWhite PeopleInterferonsNF-kappa B

Identifiers

PMID28537254
PMCPMC5458077
OpenAlexW2618122943

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.