Evidence map›Paper›PMID 28536481›Full record

ArticleScientific reports2017

TRPV4-dependent induction of a novel mammalian cold-inducible protein SRSF5 as well as CIRP and RBM3.

Takanori Fujita, Hiroaki Higashitsuji, Hisako Higashitsuji, Yu Liu, Katsuhiko Itoh, Toshiharu Sakurai, Takahiro Kojima, Shuya Kandori, Hiroyuki Nishiyama, Motoi Fukumoto and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. The life and death of RNA across temperatures.Computational and structural biotechnology journal · 2022
    Review
  5. Sex determination without sex chromosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Extracellular CIRP (eCIRP) and inflammation.Journal of leukocyte biology · 2019
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Takanori FujitaDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan.
Hiroaki HigashitsujiDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan.
Hisako HigashitsujiDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan.
Yu LiuDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan.
Katsuhiko ItohDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan.
Toshiharu SakuraiDepartment of Gastroenterology and Hepatology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka, 589-8511, Japan.
Takahiro KojimaDepartment of Urology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki, 305-8575, Japan.
Shuya KandoriDepartment of Urology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki, 305-8575, Japan.
Hiroyuki NishiyamaDepartment of Urology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki, 305-8575, Japan.
Motoi FukumotoDepartment of Pathology, Institute of Development, Aging and Cancer, Tohoku University, Sendai, Miyagi, 980-8575, Japan.
Manabu FukumotoDepartment of Pathology, Institute of Development, Aging and Cancer, Tohoku University, Sendai, Miyagi, 980-8575, Japan.
Koji ShibasakiDepartment of Molecular and Cellular Neurobiology, Gunma University Graduate School of Medicine, Maebashi, Gunma, 371-8511, Japan.ORCID 0000-0003-2330-1749
Jun FujitaDepartment of Clinical Molecular Biology, Graduate School of Medicine, Kyoto University, Kyoto, Kyoto, 606-8507, Japan. jfujita@virus.kyoto-u.ac.jp.
Kyoto University · JPUniversity of Tsukuba · JPTokyo Medical University · JPGunma University · JPKindai University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cold-inducible RNA-binding protein (CIRP) and RNA-binding motif protein 3 (RBM3) are two evolutionarily conserved RNA-binding proteins that are structurally related to hnRNPs and upregulated in response to moderately low temperatures in mammalian cells. Although contributions of splicing efficiency, the gene promoters activated upon mild hypothermia and the transcription factor Sp1 to induction of CIRP have been reported, precise mechanisms by which hypothermia and other stresses induce the expression of mammalian cold-inducible proteins (CIPs) are poorly understood. By screening the serine/arginine-rich splicing factors (SRSFs), we report that the transcript and protein levels of SRSF5 were increased in mammalian cells cultured at 32 °C. Expression of SRSF5 as well as CIRP and RBM3 were also induced by DNA damage, hypoxia, cycloheximide and hypotonicity. Immunohistochemical studies demonstrated that SRSF5 was constitutively expressed in male germ cells and the level was decreased in human testicular germ cell tumors. SRSF5 facilitated production of p19 H-RAS, and increased sensitivity to doxorubicin in human U-2 OS cells. Induction of CIPs was dependent on transient receptor potential vanilloid 4 (TRPV4) channel protein, but seemed independent of its ion channel activity. These findings indicate a previously unappreciated role for the TRP protein in linking environmental stress to splicing.

Indexed as

Cold TemperatureAnimalsCell LineCell Line, TumorCells, CulturedGene Expression RegulationHEK293 CellsHumansMaleMammalsMiceMice, Inbred C57BLMice, KnockoutNIH 3T3 CellsRNA-Binding ProteinsSerine-Arginine Splicing FactorsCIRBP protein, humanRBM3 protein, humanRNA-Binding ProteinsSerine-Arginine Splicing FactorsSRSF5 protein, humanTRPV4 protein, humanTRPV Cation Channels

Identifiers

PMID28536481
PMCPMC5442135
OpenAlexW2616682639

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.