Evidence map›Paper›PMID 28535796›Full record

ArticleOrphanet journal of rare diseases2017

Identification of EML4-ALK as an alternative fusion gene in epithelioid inflammatory myofibroblastic sarcoma.

Quan Jiang, Han-Xing Tong, Ying-Yong Hou, Yong Zhang, Jing-Lei Li, Yu-Hong Zhou, Jing Xu, Jiong-Yuan Wang, Wei-Qi Lu

Open access · goldAbstract readCase Reports
In one paragraph

Article in Orphanet journal of rare diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Quan JiangDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Han-Xing TongDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Ying-Yong HouDepartments of Pathology, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Yong ZhangDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Jing-Lei LiDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Yu-Hong ZhouDepartments of Oncology, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Jing XuDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Jiong-Yuan WangDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China.
Wei-Qi LuDepartments of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, 200032, China. lu.weiqi@zs-hospital.sh.cn.
Fudan University · CNThe First Affiliated Hospital, Sun Yat-sen University · CNSun Yat-sen University · CNZhongshan Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundKnown as solid tumors of intermediate malignant potential, most inflammatory myofibroblastic tumors (IMTs) are treatable as long as the tumor is en-bloc resected. However, in some cases, the tumors have recurred and grown rapidly after successful surgery. Some of these tumors were classified as an epithelioid inflammatory myofibroblastic sarcoma (EIMS). Most previously reported EIMSs have been caused by RANBP2-ALK fusion gene. We herein report an EIMS case caused by an EML4-ALK fusion gene.

methodsRNAseq was conducted to find out the new ALK fusion gene which could not be detected following previously reported RT-PCR methods for EIMS cases with RANBP2-ALK fusion gene. After that, RT-PCR was also conducted to further prove the newly found fusion gene. Immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH) test were applied to find out the unique morphological characters compared with the previous reported EIMS cases.

resultsWe found an EIMS case who was suffering from a rapid recurrence after cytoreducyive surgery was done to relieve the exacerbating symptoms. The patient finally died for tumor lysis syndrome after the application of crizotinib. Distinctive ALK staining under the membrane and relatively weak ALK staining in the cytoplasm could also be observed. RNAseq and RT-PCR further revealed that the tumor harbored an EML4-ALK fusion gene.

conclusionIn conclusion, this is the first EIMS demonstrated to have been caused by the formation of an EML4-ALK fusion gene. This enriches the spectrum of EIMS and enlarges the horizon for the study of EIMS. The experience we shared in managing this kind of disease by discussing aspects of its success and failure could be of great value for surgeons and pathologists.

Indexed as

Base SequenceBiomarkers, TumorHumansMaleMiddle AgedNeoplasms, Muscle TissueOncogene Proteins, FusionSarcomaBiomarkers, TumorEML4-ALK fusion protein, humanOncogene Proteins, FusionEML4-ALKEpithelioid inflammatory myofibroblastic sarcoma (EIMS)Inflammatory myofibroblastic tumors (IMTs)RANBP2-ALKRNAseq

Identifiers

PMID28535796
PMCPMC5442869
OpenAlexW2617474032

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.