Evidence map›Paper›PMID 28535251›Full record

ArticleNucleic acids research2017

Mms1 binds to G-rich regions in Saccharomyces cerevisiae and influences replication and genome stability.

Katharina Wanzek, Eike Schwindt, John A Capra, Katrin Paeschke

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. The Relevance of G-Quadruplexes for DNA Repair.International journal of molecular sciences · 2021
    Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. A Novel G-Quadruplex Binding Protein in Yeast-Slx9.Molecules (Basel, Switzerland) · 2019
    Article
  8. Article
  9. Review
  10. Structure and function of Pif1 helicase.Biochemical Society transactions · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Katharina WanzekDepartment of Biochemistry, Theodor Boveri-Institute, University of Wuerzburg, Am Hubland, D-97074 Würzburg, Germany.
Eike SchwindtEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, 9713 AV Groningen, Netherlands.
John A CapraDepartments of Biological Sciences, Biomedical Informatics, Computer Science, and Vanderbilt Genetics Institute, Center for Structural Biology, Vanderbilt University, Nashville, TN 37232, USA.
Katrin PaeschkeDepartment of Biochemistry, Theodor Boveri-Institute, University of Wuerzburg, Am Hubland, D-97074 Würzburg, Germany.
University of Würzburg · DEUniversity Medical Center Groningen · NLVanderbilt University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The regulation of replication is essential to preserve genome integrity. Mms1 is part of the E3 ubiquitin ligase complex that is linked to replication fork progression. By identifying Mms1 binding sites genome-wide in Saccharomyces cerevisiae we connected Mms1 function to genome integrity and replication fork progression at particular G-rich motifs. This motif can form G-quadruplex (G4) structures in vitro. G4 are stable DNA structures that are known to impede replication fork progression. In the absence of Mms1, genome stability is at risk at these G-rich/G4 regions as demonstrated by gross chromosomal rearrangement assays. Mms1 binds throughout the cell cycle to these G-rich/G4 regions and supports the binding of Pif1 DNA helicase. Based on these data we propose a mechanistic model in which Mms1 binds to specific G-rich/G4 motif located on the lagging strand template for DNA replication and supports Pif1 function, DNA replication and genome integrity.

Indexed as

DNA ReplicationGenomic InstabilityBinding SitesCell CycleCullin ProteinsDNA, FungalDNA HelicasesEndodeoxyribonucleasesExodeoxyribonucleasesGC Rich SequenceG-QuadruplexesModels, BiologicalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCullin ProteinsDNA, FungalDNA HelicasesEndodeoxyribonucleasesExodeoxyribonucleasesMms1 protein, S cerevisiaeMms22 protein, S cerevisiaeMRE11 protein, S cerevisiaePIF1 protein, S cerevisiaeRTT101 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID28535251
PMCPMC5570088
OpenAlexW2618664480

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.