Evidence map›Paper›PMID 28533824›Full record

ArticleClinical epigenetics2017

Analysis of the DNA methylation level of cancer-related genes in colorectal cancer and the surrounding normal mucosa.

Tamotsu Sugai, Masakazu Yoshida, Makoto Eizuka, Noriyuki Uesugii, Wataru Habano, Kouki Otsuka, Akira Sasaki, Eiichiro Yamamoto, Takayuki Matsumoto, Hiromu Suzuki

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
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  5. Review
  6. Review
  7. The methylation level of a single cancer risk marker gene reflects methylation burden in gastric mucosa.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2023
    Article
  8. Article
  9. Article
  10. Promoter methylation analysis ofAsian biomedicine : research, reviews and news · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Aberrant Promoter Hypermethylation ofIndian journal of surgical oncology · 2021
    Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Tamotsu SugaiDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Masakazu YoshidaDepartment of Surgery, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Makoto EizukaDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Noriyuki UesugiiDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Wataru HabanoDepartment of Pharmacodynamics and Molecular Genetics, School of Pharmacy, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Kouki OtsukaDepartment of Surgery, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Akira SasakiDepartment of Surgery, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Eiichiro YamamotoDepartment of Molecular Biology, Sapporo Medical University, Chuo-ku, Sapporo, 060-8556 Japan.
Takayuki MatsumotoDepartment of Internal Medicine, Division of Gastrointestinal Tract, School of Medicine, Iwate Medical University, 19-1, Morioka, 020-8505 Japan.
Hiromu SuzukiDepartment of Molecular Biology, Sapporo Medical University, Chuo-ku, Sapporo, 060-8556 Japan.
Iwate Medical University · JPSapporo Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTwo molecular pathways promote the development of colorectal cancer (CRC). One is termed "microsatellite stable" (MSS) whereas the other is characterized by "microsatellite instability" (MSI or MIN). In addition, the CpG island methylation phenotype is known to be an important alteration as a third molecular type. Thus, DNA methylation is thought to provide potential biomarkers for assessment of cancer risk in normal mucosa. In addition, it is also known that colonic location is an important parameter in the development of CRC.

methodsWe examined the surrounding normal mucosa in three parts of the colon. Next, we quantified DNA methylation levels of

resultsDNA methylation levels of

conclusionsOur results showed that DNA methylation of

Indexed as

DNA MethylationGene Regulatory NetworksAdultAgedAged, 80 and overColorectal NeoplasmsCpG IslandsEpigenesis, GeneticHumansIntercellular Signaling Peptides and ProteinsMembrane ProteinsMicroRNAsMicrosatellite InstabilityMiddle AgedMucous MembraneSecreted Frizzled-Related ProteinsDKK2 protein, humanIntercellular Signaling Peptides and ProteinsMembrane ProteinsMicroRNAsMIRN34 microRNA, humanSecreted Frizzled-Related ProteinsSFRP1 protein, humanSFRP2 protein, humanColorectal cancerCrypt isolationDNA methylationMicrosatellite instabilityNormal mucosa

Identifiers

PMID28533824
PMCPMC5437595
OpenAlexW2614320520

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.