Evidence map›Paper›PMID 28533394›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Nanomechanics of the substrate binding domain of Hsp70 determine its allosteric ATP-induced conformational change.

Soumit Sankar Mandal, Dale R Merz, Maximilian Buchsteiner, Ruxandra I Dima, Matthias Rief, Gabriel Žoldák

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
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  3. Prediction of the Stability of Protein Substructures Using AI/ML Techniques.Methods in molecular biology (Clifton, N.J.) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Soumit Sankar MandalPhysik Department E22, Technische Universität München, 85748 Garching, Germany.
Dale R MerzDepartment of Chemistry, University of Cincinnati, Cincinnati, OH 45221.ORCID 0000-0001-5815-2232
Maximilian BuchsteinerPhysik Department E22, Technische Universität München, 85748 Garching, Germany.
Ruxandra I DimaDepartment of Chemistry, University of Cincinnati, Cincinnati, OH 45221.
Matthias RiefPhysik Department E22, Technische Universität München, 85748 Garching, Germany; gabriel.zoldak@tum.de mrief@ph.tum.de.
Gabriel ŽoldákPhysik Department E22, Technische Universität München, 85748 Garching, Germany; gabriel.zoldak@tum.de mrief@ph.tum.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Owing to the cooperativity of protein structures, it is often almost impossible to identify independent subunits, flexible regions, or hinges simply by visual inspection of static snapshots. Here, we use single-molecule force experiments and simulations to apply tension across the substrate binding domain (SBD) of heat shock protein 70 (Hsp70) to pinpoint mechanical units and flexible hinges. The SBD consists of two nanomechanical units matching 3D structural parts, called the α- and β-subdomain. We identified a flexible region within the rigid β-subdomain that gives way under load, thus opening up the α/β interface. In exactly this region, structural changes occur in the ATP-induced opening of Hsp70 to allow substrate exchange. Our results show that the SBD's ability to undergo large conformational changes is already encoded by passive mechanics of the individual elements.

Indexed as

Adenosine TriphosphateAllosteric RegulationAllosteric SiteAmino Acid SequenceEscherichia coliEscherichia coli ProteinsHSP70 Heat-Shock ProteinsKineticsMicroscopy, Atomic ForceMolecular Dynamics SimulationProtein BindingProtein ConformationProtein DomainsSubstrate SpecificityAdenosine TriphosphateEscherichia coli ProteinsHSP70 Heat-Shock Proteinselasticityforcelaser trappingparallel pathwaysprotein extension

Identifiers

PMID28533394
PMCPMC5468673

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.