Evidence map›Paper›PMID 28533336›Full record

ArticleG3 (Bethesda, Md.)2017

A Coding Variant in the Gene Bardet-Biedl Syndrome 4 (

Tracy Chew, Bianca Haase, Roslyn Bathgate, Cali E Willet, Maria K Kaukonen, Lisa J Mascord, Hannes T Lohi, Claire M Wade

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  11. Complex StructuralG3 (Bethesda, Md.) · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Tracy ChewSchool of Life and Environmental Sciences, Faculty of Science, University of Sydney, 2006, Australia tracy.chew@sydney.edu.au claire.wade@sydney.edu.au.ORCID 0000-0001-9529-7705
Bianca HaaseSydney School of Veterinary Science, Faculty of Science, University of Sydney, 2006, Australia.
Roslyn BathgateSydney School of Veterinary Science, Faculty of Science, University of Sydney, 2006, Australia.
Cali E WilletSydney Informatics Hub, Core Research Facilities, University of Sydney, 2006, Australia.ORCID 0000-0001-8449-1502
Maria K KaukonenDepartment of Veterinary Biosciences, University of Helsinki, 00014, Finland.
Lisa J MascordSchool of Life and Environmental Sciences, Faculty of Science, University of Sydney, 2006, Australia.
Hannes T LohiDepartment of Veterinary Biosciences, University of Helsinki, 00014, Finland.ORCID 0000-0003-1087-5532
Claire M WadeSchool of Life and Environmental Sciences, Faculty of Science, University of Sydney, 2006, Australia tracy.chew@sydney.edu.au claire.wade@sydney.edu.au.ORCID 0000-0003-3413-4771
University of Sydney · AUUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Progressive retinal atrophy is a common cause of blindness in the dog and affects >100 breeds. It is characterized by gradual vision loss that occurs due to the degeneration of photoreceptor cells in the retina. Similar to the human counterpart retinitis pigmentosa, the canine disorder is clinically and genetically heterogeneous and the underlying cause remains unknown for many cases. We use a positional candidate gene approach to identify putative variants in the Hungarian Puli breed using genotyping data of 14 family-based samples (CanineHD BeadChip array, Illumina) and whole-genome sequencing data of two proband and two parental samples (Illumina HiSeq 2000). A single nonsense SNP in exon 2 of

Indexed as

Codon, NonsenseDog DiseasesPolymorphism, Single NucleotideRetinal DiseasesAllelesAnimalsDogsExonsFemaleMaleMiceMice, KnockoutMicrotubule-Associated ProteinsSperm MotilitySperm TailBBS4 protein, mouseCodon, NonsenseMicrotubule-Associated ProteinsblindnessHungarian Puliinfertilityobesitywhole-genome sequencing

Identifiers

PMID28533336
PMCPMC5499139
OpenAlexW2617375505

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.