Evidence map›Paper›PMID 28530838›Full record

ArticleSLAS discovery : advancing life sciences R & D2017

An Innovative High-Throughput Screening Approach for Discovery of Small Molecules That Inhibit TNF Receptors.

Chih Hung Lo, Nagamani Vunnam, Andrew K Lewis, Ting-Lan Chiu, Benjamin E Brummel, Tory M Schaaf, Benjamin D Grant, Prachi Bawaskar, David D Thomas, Jonathan N Sachs

Open access · bronzeAbstract read
In one paragraph

Article in SLAS discovery : advancing life sciences R & D, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 61 citations in OpenAlex.

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  9. Peptide-based allosteric inhibitor targets TNFR1 conformationally active region and disables receptor-ligand signaling complex.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Chih Hung Lo1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
Nagamani Vunnam1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
Andrew K Lewis1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
Ting-Lan Chiu1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
Benjamin E Brummel1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
Tory M Schaaf2 Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA.
Benjamin D Grant3 Fluorescence Innovations, Inc., Minneapolis, MN, USA.
Prachi Bawaskar2 Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA.
David D Thomas2 Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA.
Jonathan N Sachs1 Department of Biomedical Engineering, University of Minnesota, Minneapolis, MN, USA.
University of Minnesota · USFluorescence Innovations (United States) · US

Funding

Calcium Pump Activators for Heart Failure TherapyR01HL129814 · NHLBI · UNIVERSITY OF MINNESOTA · PI THOMAS, DAVID D · 2015 to 2018
$3.2M
Protein Oxidation, Structure, &Function in Aging MuscleR01AG026160 · NIA · UNIVERSITY OF MINNESOTA TWIN CITIES · PI THOMAS, DAVID D · 2004 to 2008
$2.2M
Live-Cell Fluorescence Lifetime FRET Assays for HTSR42DA037622 · NIDA · FLUORESCENCE INNOVATIONS, INC. · PI GILLISPIE, GREGORY DAVID · 2015 to 2016
$1.5M
Dynamics of transmembrane dimers in TNF-Receptors by EPR and molecular simulationR01GM107175 · NIGMS · UNIVERSITY OF MINNESOTA · PI SACHS, JONATHAN N · 2014 to 2017
$1.3M
NHLBI NIH HHS R01 HL129814NIA NIH HHS R01 AG026160NIDA NIH HHS R42 DA037622NIGMS NIH HHS R01 GM107175
6 · The paper itself

Abstract

Tumor necrosis factor receptor 1 (TNFR1) is a transmembrane receptor that binds tumor necrosis factor or lymphotoxin-alpha and plays a critical role in regulating the inflammatory response. Upregulation of these ligands is associated with inflammatory and autoimmune diseases. Current treatments reduce symptoms by sequestering free ligands, but this can cause adverse side effects by unintentionally inhibiting ligand binding to off-target receptors. Hence, there is a need for new small molecules that specifically target the receptors, rather than the ligands. Here, we developed a TNFR1 FRET biosensor expressed in living cells to screen compounds from the NIH Clinical Collection. We used an innovative high-throughput fluorescence lifetime screening platform that has exquisite spatial and temporal resolution to identify two small-molecule compounds, zafirlukast and triclabendazole, that inhibit the TNFR1-induced IκBα degradation and NF-κB activation. Biochemical and computational docking methods were used to show that zafirlukast disrupts the interactions between TNFR1 pre-ligand assembly domain (PLAD), whereas triclabendazole acts allosterically. Importantly, neither compound inhibits ligand binding, proving for the first time that it is possible to inhibit receptor activation by targeting TNF receptor-receptor interactions. This strategy should be generally applicable to other members of the TNFR superfamily, as well as to oligomeric receptors in general.

Indexed as

Biosensing TechniquesDimerizationDrug Evaluation, PreclinicalFluorescence Resonance Energy TransferHEK293 CellsHigh-Throughput Screening AssaysHumansIndolesLigandsMolecular Docking SimulationMutant ProteinsNF-kappa BNF-KappaB Inhibitor alphaPhenylcarbamatesProtein DomainsProteolysisIndolesLigandsMutant ProteinsNF-kappa BNF-KappaB Inhibitor alphaPhenylcarbamatesReceptors, Tumor Necrosis FactorSmall Molecule LibrariesSulfonamidesTosyl CompoundsTriclabendazolezafirlukastNF-κB inhibitionpre-ligand assembly domainreceptor–receptor interactiontime-resolved FRETtumor necrosis factor receptor 1

Identifiers

PMID28530838
PMCPMC5899890
OpenAlexW2619450713

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.