Evidence map›Paper›PMID 28530644›Full record

ArticleThe Journal of clinical investigation2017

Intestinal fungi contribute to development of alcoholic liver disease.

An-Ming Yang, Tatsuo Inamine, Katrin Hochrath, Peng Chen, Lirui Wang, Cristina Llorente, Sena Bluemel, Phillipp Hartmann, Jun Xu, Yukinori Koyama and 19 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 287 papers.

0numbers the graph read from it
0cells of the map it votes in
287citing papers in PubMed
17.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

287 citing papers in PubMed, 456 citations in OpenAlex.

  1. [Alcohol liver disease: immunoregulatory mechanisms and precision therapeutic targets].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Detection of Fungal Translocation in Patients With Alcohol Use Disorder Using a Real-Time PCR Assay.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2026
    Article
  10. Review
  11. Review
  12. Review
  13. Review
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  15. Article
  16. Review
  17. Review
  18. mBio · 2025
    Article
  19. Review
  20. Serum Levels ofMicroorganisms · 2025
    Article

227 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 10 institutions in 6 countries.

An-Ming YangDepartment of Medicine, UCSD, La Jolla, California, USA.
Tatsuo InamineDepartment of Medicine, UCSD, La Jolla, California, USA.
Katrin HochrathDepartment of Medicine, UCSD, La Jolla, California, USA.
Peng ChenDepartment of Medicine, UCSD, La Jolla, California, USA.
Lirui WangDepartment of Medicine, UCSD, La Jolla, California, USA.
Cristina LlorenteDepartment of Medicine, UCSD, La Jolla, California, USA.
Sena BluemelDepartment of Medicine, UCSD, La Jolla, California, USA.
Phillipp HartmannDepartment of Medicine, UCSD, La Jolla, California, USA.
Jun XuDepartment of Surgery, UCSD, La Jolla, California, USA.
Yukinori KoyamaDepartment of Surgery, UCSD, La Jolla, California, USA.
Tatiana KisselevaDepartment of Surgery, UCSD, La Jolla, California, USA.
Manolito G TorralbaJ. Craig Venter Institute, La Jolla, California, USA.
Kelvin MonceraJ. Craig Venter Institute, La Jolla, California, USA.
Karen BeeriJ. Craig Venter Institute, La Jolla, California, USA.
Chien-Sheng ChenInstitute of Systems Biology and Bioinformatics, National Central University, Taoyuan City, Taiwan.
Kim FreeseInstitute of Biochemistry (Emil-Fischer Zentrum), Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Claus HellerbrandInstitute of Biochemistry (Emil-Fischer Zentrum), Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Serene Ml LeeDepartment of General, Visceral and Transplantation Surgery, Hospital of the LMU Munich, Munich, Germany.
Hal M HoffmanDepartment of Medicine, UCSD, La Jolla, California, USA.
Wajahat Z MehalSection of Digestive Diseases, Yale University School of Medicine, New Haven, Connecticut, USA.
Guadalupe Garcia-TsaoSection of Digestive Diseases, Yale University School of Medicine, New Haven, Connecticut, USA.
Ece A MutluDepartment of Medicine, Rush University Medical Center, Chicago, Illinois, USA.
Ali KeshavarzianDepartment of Medicine, Rush University Medical Center, Chicago, Illinois, USA.
Gordon D BrownAberdeen Fungal Group, Medical Research Council Centre for Medical Mycology, University of Aberdeen, Aberdeen, United Kingdom.
Samuel B HoDepartment of Medicine, UCSD, La Jolla, California, USA.
Ramon BatallerLiver Center, Departments of Medicine and Nutrition, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Peter StärkelSaint Luc University Hospital, Université Catholique de Louvain, Brussels, Belgium.
Derrick E FoutsJ. Craig Venter Institute, Rockville, Maryland, USA.
Bernd SchnablDepartment of Medicine, UCSD, La Jolla, California, USA.
University of California San Diego · USJ. Craig Venter Institute · USFriedrich-Alexander-Universität Erlangen-Nürnberg · DERush University Medical Center · USYale University · USLMU Klinikum · DENational Central University · TWUCLouvain · BEUniversity of Aberdeen · GBUniversity of North Carolina at Chapel Hill · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI Mario Strazzabosco · 1986 to 2026
$31.1M
Molecular Subtypes for Targeted Therapies in Alcoholic HepatitisU01AA021908 · NIAAA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BATALLER, RAMON · 2013 to 2017
$6.0M
Inactivation of Hepatic Stellate Cells During Reversal of Liver FibrosisR01DK099205 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRENNER, DAVID A., KISSELEVA, TATIANA · 2014 to 2025
$4.8M
The Role of the Intestinal Mycobiome in Alcoholic Liver DiseaseR01AA024726 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bernd G. Schnabl · 2018 to 2026
$3.9M
Microbiome and intestinal innate immune response in alcoholic liver diseaseR01AA020703 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHNABL, BERND G. · 2011 to 2020
$3.6M
Brain-gut circadian rhythm interactions in alcohol-induced gut leakinessR01AA020216 · NIAAA · RUSH UNIVERSITY MEDICAL CENTER · PI KESHAVARZIAN, ALI, TUREK, FRED W · 2010 to 2014
$3.0M
Microbiome as Therapeutic Target in Alcoholic HepatitisU01AA021856 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRENNER, DAVID A., SCHNABL, BERND G. · 2013 to 2017
$2.1M
Role of Alcohol and Circadian Disruption in Inflammation and Colon CancerR01AA023417 · NIAAA · RUSH UNIVERSITY MEDICAL CENTER · PI KESHAVARZIAN, ALI, KHAZAIE, KHASHAYARSHA · 2014 to 2018
$2.0M
Systems Biology Approach to Identifying Biomarkers for Alcoholic Liver DiseaseRC2AA019405 · NIAAA · RUSH UNIVERSITY MEDICAL CENTER · PI GILLEVET, PATRICK MARTIN, KESHAVARZIAN, ALI · 2009 to 2010
$2.0M
Targeting DAMPs in Alcoholic HepatitisU01AA021912 · NIAAA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MEHAL, WAJAHAT ZAFAR, SCHWABE, ROBERT F. · 2013 to 2017
$1.9M
The Role of the Intestinal Mycobiome in Alcoholic Liver DiseaseU01AA024726 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHNABL, BERND G. · 2017 to 2017
$353k
BLRD VA I01 BX002213BLRD VA I01 BX003259Medical Research Council MR/N006364/1NCATS NIH HHS UL1 TR001863NIAAA NIH HHS R01 AA020216NIAAA NIH HHS R01 AA020703NIAAA NIH HHS R01 AA023417NIAAA NIH HHS R01 AA024726NIAAA NIH HHS RC2 AA019405NIAAA NIH HHS U01 AA021856NIAAA NIH HHS U01 AA021908NIAAA NIH HHS U01 AA021912NIAAA NIH HHS U01 AA024726NIDDK NIH HHS P30 DK034989NIDDK NIH HHS R01 DK099205Wellcome Trust 102705/Z/13/Z
6 · The paper itself

Abstract

Chronic liver disease with cirrhosis is the 12th leading cause of death in the United States, and alcoholic liver disease accounts for approximately half of all cirrhosis deaths. Chronic alcohol consumption is associated with intestinal bacterial dysbiosis, yet we understand little about the contribution of intestinal fungi, or mycobiota, to alcoholic liver disease. Here we have demonstrated that chronic alcohol administration increases mycobiota populations and translocation of fungal β-glucan into systemic circulation in mice. Treating mice with antifungal agents reduced intestinal fungal overgrowth, decreased β-glucan translocation, and ameliorated ethanol-induced liver disease. Using bone marrow chimeric mice, we found that β-glucan induces liver inflammation via the C-type lectin-like receptor CLEC7A on Kupffer cells and possibly other bone marrow-derived cells. Subsequent increases in IL-1β expression and secretion contributed to hepatocyte damage and promoted development of ethanol-induced liver disease. We observed that alcohol-dependent patients displayed reduced intestinal fungal diversity and Candida overgrowth. Compared with healthy individuals and patients with non-alcohol-related cirrhosis, alcoholic cirrhosis patients had increased systemic exposure and immune response to mycobiota. Moreover, the levels of extraintestinal exposure and immune response correlated with mortality. Thus, chronic alcohol consumption is associated with an altered mycobiota and translocation of fungal products. Manipulating the intestinal mycobiome might be an effective strategy for attenuating alcohol-related liver disease.

Indexed as

Gastrointestinal MicrobiomeAnimalsCandidaDectin-1HepatocytesHumansIntestinesKupffer CellsLectins, C-TypeLiver Diseases, AlcoholicMiceMice, KnockoutCLEC7A protein, humanDectin-1Lectins, C-Type

Identifiers

PMID28530644
PMCPMC5490775
OpenAlexW2616380171

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.