Evidence map›Paper›PMID 28527895›Full record

ArticleFish & shellfish immunology2017

Suppression of PmRab11 inhibits YHV infection in Penaeus monodon.

Akechai Kongprajug, Sakol Panyim, Chalermporn Ongvarrasopone

Open access · greenAbstract read
In one paragraph

Article in Fish & shellfish immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Akechai KongprajugInstitute of Molecular Biosciences, Mahidol University (Salaya Campus), Nakhon Pathom, 73170 Thailand.
Sakol PanyimInstitute of Molecular Biosciences, Mahidol University (Salaya Campus), Nakhon Pathom, 73170 Thailand; Department of Biochemistry, Faculty of Science, Mahidol University, Bangkok, 10400 Thailand.
Chalermporn OngvarrasoponeInstitute of Molecular Biosciences, Mahidol University (Salaya Campus), Nakhon Pathom, 73170 Thailand. Electronic address: chalermporn.ong@mahidol.ac.th.
Mahidol University · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yellow head virus (YHV) is one of the most serious pathogens that causes worldwide shrimp production loss. It enters the cells via clathrin-mediated endocytosis and utilizes small GTPase Rab proteins such as PmRab5 and PmRab7 for intracellular trafficking. In this study, molecular cloning and functional analysis of Rab11 during YHV infection were investigated. PmRab11 cDNA was cloned by Rapid amplification of cDNA ends (RACEs). It contained two forms of sizes 1200 and 1050 bp distinct at the 5' UTR. The coding region of PmRab11 was 645 bp, encoding 214 amino acids. It also demonstrated the characteristics of Rab11 proteins containing five GTP-binding domains, five Rab family domains, four Rab subfamily domains and a prenylation site at the C-terminus. Suppression of PmRab11 using dsRNA-PmRab11 either before or after YHV-challenge resulted in significant inhibition of YHV levels in the hemocytes and viral release in the supernatant in both mRNA and protein levels. In addition, the silencing effect of PmRab11 in YHV-infected shrimps resulted in a delay in shrimp mortality for at least 2 days. Immunofluorescence study showed co-localization between PmRab11 and YHV at 24-72 h post YHV-challenge. In contrast, the co-localization signals were absence in the PmRab11 knockdown hemocytes and the YHV signals accumulated at the perinuclear region at 24 h post YHV-challenge. Then, accumulation of YHV was hardly observed after 48-72 h. These results suggested that PmRab11 is required for YHV infection in shrimp.

Indexed as

Amino Acid SequenceAnimalsArthropod ProteinsBase SequenceCloning, MolecularDNA, ComplementaryPenaeidaePhylogenyrab11 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, MessengerRoniviridaeSequence AlignmentArthropod ProteinsDNA, Complementaryrab11 GTP-Binding Proteinsrab GTP-Binding ProteinsRNA, MessengerBlack tiger shrimpExocytosisRecycling endosomeViral buddingViral transportation

Identifiers

PMID28527895
PMCPMC7173183
OpenAlexW2615785657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.