Evidence map›Paper›PMID 28527099›Full record

ArticleVirus genes2017

Molecular diversity among viroids infecting chrysanthemum in India.

C R Adkar-Purushothama, G Chennappa, K Poornachandra Rao, M Y Sreenivasa, P K Maheshwar, M N Nagendra Prasad, T Sano

Abstract read
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In one paragraph

Article in Virus genes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

C R Adkar-PurushothamaPlant Pathology Laboratory, Faculty of Agriculture and Life Sciences, Hirosaki University, Hirosaki, 036-8561, Aomori, Japan. charith.adkar@usherbrooke.ca.
G ChennappaDepartment of Studies in Microbiology, University of Mysore, Manasagangothri, Mysore, 570 006, India.
K Poornachandra RaoDepartment of Studies in Microbiology, University of Mysore, Manasagangothri, Mysore, 570 006, India.
M Y SreenivasaDepartment of Studies in Microbiology, University of Mysore, Manasagangothri, Mysore, 570 006, India.
P K MaheshwarDepartment of Microbiology, Yuvaraja's College, University of Mysore, Mysore, 570 005, Karnataka, India.
M N Nagendra PrasadDepartment of Studies in Biotechnology, Sri Jayachamarajendra College of Engineering, Manasagangothri, Mysore, 570 006, India.
T SanoPlant Pathology Laboratory, Faculty of Agriculture and Life Sciences, Hirosaki University, Hirosaki, 036-8561, Aomori, Japan. sano@hirosaki-u.ac.jp.
University of Mysore · INHirosaki University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Association of Chrysanthemum stunt viroid (CSVd) and Chrysanthemum chlorotic mottle viroid (CChMVd) with the Chrysanthemum plants exhibiting severe stunting, distinct yellow leaf mottling, and chlorosis was detected in the main chrysanthemum-growing regions of India. Sequence analysis of 90 cDNA clones obtained for CSVd and CChMVd, representing the chrysanthemum-growing regions of India, revealed the high degree of sequence variation throughout the genome under natural conditions. Additionally, all the analyzed CChMVd clones revealed the presence of UUUC in the tetraloop, a signature of symptomatic variants in susceptible cultivars. Phylogenetic analysis revealed that Indian CSVd is closely related to European isolates from ornamentals, whereas CChMVd clustered along with the isolates reported from the East Asian countries.

Indexed as

Genetic VariationBase SequenceChrysanthemumIndiaMolecular Sequence DataNucleic Acid ConformationPhylogenyPlant DiseasesRNA, ViralViroidsRNA, ViralChrysanthemumChrysanthemum chlorotic mottle viroidChrysanthemum stunt viroidRT-PCRViroids

Identifiers

PMID28527099
OpenAlexW2616420948

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.