Evidence map›Paper›PMID 28526988›Full record

ArticleTropical animal health and production2017

Identification of candidate genes for paratuberculosis resistance in the native Italian Garfagnina goat breed.

Francesca Cecchi, Claudia Russo, Daniela Iamartino, Alessia Galiero, Barbara Turchi, Filippo Fratini, Sara Degl'Innocenti, Raffaele Mazza, Stefano Biffani, Giovanna Preziuso and 1 more

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In one paragraph

Article in Tropical animal health and production, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

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  5. Large-scale serological survey onFrontiers in veterinary science · 2024
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  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Francesca CecchiDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy. francesca.cecchi@unipi.it.ORCID http://orcid.org/0000-0001-5483-6354
Claudia RussoDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Daniela IamartinoLaboratorio Genetica e Servizi (LGS), Associazione Italiana Allevatori (AIA), via Bergamo, 292, Cremona, Italy.
Alessia GalieroDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Barbara TurchiDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Filippo FratiniDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Sara Degl'InnocentiDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Raffaele MazzaLaboratorio Genetica e Servizi (LGS), Associazione Italiana Allevatori (AIA), via Bergamo, 292, Cremona, Italy.
Stefano BiffaniIstituto di Biologia e Biotecnologia Agraria (IBBA-CNR), Consiglio Nazionale Delle Ricerche, Via Einstein Cascina Codazza, Lodi, Italy.
Giovanna PreziusoDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
Carlo CantileDepartment of Veterinary Sciences, University of Pisa, Viale delle Piagge 2, Pisa, Italy.
University of Pisa · ITIstituto di Biologia e Biotecnologia Agraria · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paratuberculosis disease is a chronic bacterial disease infection of ruminants of global relevance, caused by MAP (Mycobacterium avium subsp. paratuberculosis). The present study was conducted on the Garfagnina goat breed that is an Italian native goat population registered on the Tuscan regional repertory of genetic resources at risk of extinction. Forty-eight adult goats (27 serologically positive to MAP-positive and 21 serologically negative to MAP-negative) belonging to a single flock that had experienced annual mortalities due to MAP infection were identified and genotyped with the Illumina GoatSNP60 BeadChip. Diagnosis was achieved by serological tests, as well as post-mortem examination of affected animals. A genome-wide scan was then performed on the individual marker genotypes, in an attempt to identify genomic regions associated with MAP infection disease. Nine significant markers were highlighted and they were located within, or nearby, annotated genes. Two genes found in this study encode are linked to protein kinases that are among the most important enzymes involved in the immune response to Johne's disease, and four genes are involved in the functions of the Golgi complex.

Indexed as

AnimalsDisease ResistanceFemaleGenomeGoat DiseasesGoatsItalyMaleMycobacterium avium subsp. paratuberculosisParatuberculosisDisease susceptibilityGarfagnina goat breedGoatSNP60 BeadChipGranulomatous enteritisGWAS paratuberculosis

Identifiers

PMID28526988
OpenAlexW2615620968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.