Evidence map›Paper›PMID 28526911›Full record

ArticlePlant reproduction2017

Dynamics of post-translationally modified histones during barley pollen embryogenesis in the presence or absence of the epi-drug trichostatin A.

Pooja Pandey, Diaa S Daghma, Andreas Houben, Jochen Kumlehn, Michael Melzer, Twan Rutten

Abstract read
PubMed Publisher
In one paragraph

Article in Plant reproduction, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Anther Culture Protocols for Barley and Wheat.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  4. The Roads to Haploid Embryogenesis.Plants (Basel, Switzerland) · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Pooja PandeyLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Diaa S DaghmaLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Andreas HoubenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Jochen KumlehnLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Michael MelzerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Twan RuttenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany. rutten@ipk-gatersleben.de.ORCID 0000-0001-5891-6503
Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DEJustus-Liebig-Universität Gießen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageImproving pollen embryogenesis. Despite the agro-economic importance of pollen embryogenesis, the mechanisms underlying this process are still poorly understood. We describe the dynamics of chromatin modifications (histones H3K4me2, H3K9ac, H3K9me2, and H3K27me3) and chromatin marks (RNA polymerase II CDC phospho-Ser5, and CENH3) during barley pollen embryogenesis. Immunolabeling results show that, in reaction to stress, immature pollen rapidly starts reorganizing several important chromatin modifications indicative of a change in cell fate. This new chromatin modification pattern was accomplished within 24 h from whereon it remained unaltered during subsequent mitotic activity. This indicates that cell fate transition, the central element of pollen embryogenesis, is completed early on during the induction process. Application of the histone deacetylase inhibitor trichostatin A stimulated pollen embryogenesis when used on pollen with a gametophytic style chromatin pattern. However, when this drug was administered to embryogenic pollen, the chromatin markers reversed toward a gametophytic profile, embryogenesis was halted and all pollen invariably died.

Indexed as

ChromatinEmbryonic DevelopmentEpigenesis, GeneticHistonesHordeumHydroxamic AcidsPollenProtein Processing, Post-TranslationalChromatinHistonesHydroxamic Acidstrichostatin AChromatinEmbryogenesisPollenTrichostatin A

Identifiers

PMID28526911
OpenAlexW2614566627

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.