Evidence map›Paper›PMID 28525279›Full record

ArticleJournal of medicinal chemistry2017

Double-Winged 3-Hydroxypyrimidine-2,4-diones: Potent and Selective Inhibition against HIV-1 RNase H with Significant Antiviral Activity.

Sanjeev Kumar V Vernekar, Jing Tang, Bulan Wu, Andrew D Huber, Mary C Casey, Nataliya Myshakina, Daniel J Wilson, Jayakanth Kankanala, Karen A Kirby, Michael A Parniak and 2 more

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

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  13. 1,2,4-Triazolo[1,5-Molecules (Basel, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Sanjeev Kumar V VernekarCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Jing TangCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Bulan WuCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Andrew D HuberDepartment of Veterinary Pathobiology, Christopher S. Bond Life Sciences Center, University of Missouri , Columbia, Missouri 65211, United States.
Mary C CaseyDepartment of Molecular Microbiology and Immunology, Christopher S. Bond Life Sciences Center, University of Missouri School of Medicine , Columbia, Missouri 65211, United States.
Nataliya MyshakinaDepartment of Natural Science, Chatham University , 1 Woodland Road, Pittsburgh, Pennsylvania 15232, United States.
Daniel J WilsonCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Jayakanth KankanalaCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Karen A KirbyDepartment of Molecular Microbiology and Immunology, Christopher S. Bond Life Sciences Center, University of Missouri School of Medicine , Columbia, Missouri 65211, United States.
Michael A ParniakDepartment of Microbiology & Molecular Genetics, University of Pittsburgh School of Medicine , Pittsburgh, Pennsylvania 15219, United States.
Stefan G SarafianosDepartment of Molecular Microbiology and Immunology, Christopher S. Bond Life Sciences Center, University of Missouri School of Medicine , Columbia, Missouri 65211, United States.
Zhengqiang WangCenter for Drug Design, Academic Health Center, University of Minnesota , Minneapolis, Minnesota 55455, United States.ORCID 0000-0002-1326-5986
University of Minnesota · USUniversity of Missouri · USChatham University · USUniversity of Pittsburgh · US

Funding

Novel antivirals targeting the RNase H activity of HIV reverse transcriptaseR01AI100890 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G, WANG, ZHENGQIANG · 2012 to 2016
$3.6M
NIAID NIH HHS R01 AI100890
6 · The paper itself

Abstract

Human immunodeficiency virus (HIV) reverse transcriptase (RT)-associated ribonuclease H (RNase H) remains the only virally encoded enzymatic function yet to be exploited as an antiviral target. One of the possible challenges may be that targeting HIV RNase H is confronted with a steep substrate barrier. We have previously reported a 3-hydroxypyrimidine-2,4-dione (HPD) subtype that potently and selectively inhibited RNase H without inhibiting HIV in cell culture. We report herein a critical redesign of the HPD chemotype featuring an additional wing at the C5 position that led to drastically improved RNase H inhibition and significant antiviral activity. Structure-activity relationship (SAR) concerning primarily the length and flexibility of the two wings revealed important structural features that dictate the potency and selectivity of RNase H inhibition as well as the observed antiviral activity. Our current medicinal chemistry data also revealed that the RNase H biochemical inhibition largely correlated the antiviral activity.

Indexed as

Anti-HIV AgentsCatalytic DomainCell LineChemistry Techniques, SyntheticDrug Evaluation, PreclinicalEnzyme InhibitorsHIV Integrase InhibitorsHumansPyrimidinonesRibonuclease H, Human Immunodeficiency VirusStructure-Activity RelationshipAnti-HIV AgentsEnzyme InhibitorsHIV Integrase InhibitorsPyrimidinonesRibonuclease H, Human Immunodeficiency Virus

Identifiers

PMID28525279
PMCPMC5526604
OpenAlexW2615815774

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.