Evidence map›Paper›PMID 28523731›Full record

ArticleMicrobiologyOpen2017

wblE2 transcription factor in Streptomyces griseus S4-7 plays an important role in plant protection.

Hyun Ji Cho, Young Sang Kwon, Da-Ran Kim, Gyeongjun Cho, Seong Won Hong, Dong-Won Bae, Youn-Sig Kwak

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Microbiology spectrum · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hyun Ji ChoDivision of Applied Life Science (BK21 Plue) and IALS, Gyeongsang National University, Jinju, Korea.
Young Sang KwonEnvironmental Chemistry Research Center, Korea Institute of Toxicology, Jinju, Korea.
Da-Ran KimDepartment of Plant Medicine, Gyeongsang National University, Jinju, Korea.
Gyeongjun ChoDivision of Applied Life Science (BK21 Plue) and IALS, Gyeongsang National University, Jinju, Korea.
Seong Won HongDivision of Applied Life Science (BK21 Plue) and IALS, Gyeongsang National University, Jinju, Korea.
Dong-Won BaeCenter for Research Facilities, Gyeongsang National University, Jinju, Korea.
Youn-Sig KwakDivision of Applied Life Science (BK21 Plue) and IALS, Gyeongsang National University, Jinju, Korea.ORCID 0000-0003-2139-1808
Gyeongsang National University · KRKorea Institute of Toxicology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptomyces griseus S4-7 was originally isolated from the strawberry rhizosphere as a microbial agent responsible for Fusarium wilt suppressive soils. S. griseus S4-7 shows specific and pronounced antifungal activity against Fusarium oxysporum f. sp. fragariae. In the Streptomyces genus, the whi transcription factors are regulators of sporulation, cell differentiation, septation, and secondary metabolites production. wblE2 function as a regulator has emerged as a new group in whi transcription factors. In this study, we reveal the involvement of the wblE2 transcription factor in the plant-protection by S. griseus S4-7. We generated ΔwblE, ΔwblE2, ΔwhiH, and ΔwhmD gene knock-out mutants, which showed less antifungal activity both in vitro and in planta. Among the mutants, wblE2 mutant failed to protect the strawberry against the Fusarium wilt pathogen. Transcriptome analyses revealed major differences in the regulation of phenylalanine metabolism, polyketide and siderophore biosynthesis between the S4-7 and the wblE2 mutant. The results contribute to our understanding of the role of streptomycetes wblE2 genes in a natural disease suppressing system.

Indexed as

AntibiosisBacterial ProteinsAnti-Infective AgentsCluster AnalysisComputational BiologyDisease ResistanceGene ExpressionGene Expression ProfilingGene Knockout TechniquesGenome, BacterialMutationPhenotypePlant DiseasesPlant RootsPlantsPlasmidsAnti-Infective AgentsBacterial ProteinsTranscription Factorsantibiotic productionbiological controlstreptomyceteswblE2 transcription factors

Identifiers

PMID28523731
PMCPMC5635160
OpenAlexW2614561341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.