Evidence map›Paper›PMID 28521505›Full record

ArticleBiointerphases2017

Orientation and conformation of osteocalcin adsorbed onto calcium phosphate and silica surfaces.

Luisa A Scudeller, Selvi Srinivasan, Alexandre M Rossi, Patrick S Stayton, Gary P Drobny, David G Castner

Open access · bronzeAbstract read
In one paragraph

Article in Biointerphases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Calcium and hydroxyapatite binding site of human vitronectin provides insights to abnormal deposit formation.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Luisa A ScudellerNational ESCA and Surface Analysis Center for Biomedical Problems, University of Washington, Seattle, Washington 98195-1653 and Department of Applied Physics, Brazilian Center for Physics Research (CBPF), R. Dr. Xavier Sigaud, 150-Urca, 22290-180 Rio de Janeiro, Brazil.
Selvi SrinivasanDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-1653.
Alexandre M RossiDepartment of Applied Physics, Brazilian Center for Physics Research (CBPF), R. Dr. Xavier Sigaud, 150-Urca, 22290-180 Rio de Janeiro, Brazil.
Patrick S StaytonNational ESCA and Surface Analysis Center for Biomedical Problems, University of Washington, Seattle, Washington 98195-1653 and Department of Bioengineering, University of Washington, Seattle, Washington 98195-1653.
Gary P DrobnyDepartment of Chemistry, University of Washington, Seattle, Washington 98195-1653.
David G CastnerNational ESCA and Surface Analysis Center for Biomedical Problems, University of Washington, Seattle, Washington 98195-1653; Department of Bioengineering, University of Washington, Seattle, Washington 98195-1653; and Department of Chemical Engineering, University of Washington, Seattle, Washington 98195-1653.
University of Washington · USBrazilian Center for Research in Energy and Materials · BRCentro Brasileiro de Pesquisas Físicas · BR

Funding

Surface Analysis Facility for Biomedical ProblemsP41EB002027 · NIBIB · UNIVERSITY OF WASHINGTON · PI CASTNER, DAVID G · 2003 to 2019
$17.6M
Protein-Crystal Molecular Recognition in BiomineralizationR01DE012554 · NIDCR · UNIVERSITY OF WASHINGTON · PI STAYTON, PATRICK S. · 1997 to 2012
$6.2M
NIBIB NIH HHS P41 EB002027NIDCR NIH HHS R01 DE012554Wellcome Trust
6 · The paper itself

Abstract

Adsorption isotherms, circular dichroism (CD) spectroscopy, x-ray photoelectron spectroscopy (XPS), and time-of-flight secondary ion mass spectrometry (ToF-SIMS) were used to investigate the adsorption of human osteocalcin (hOC) and decarboxylated (i.e., Gla converted back to Glu) hOC (dhOC) onto various calcium phosphate surfaces as well as silica surfaces. The adsorption isotherms and XPS nitrogen signals were used to track the amount of adsorbed hOC and dhOC. The intensities of key ToF-SIMS amino acid fragments were used to assess changes in the structure of adsorbed hOC and dhOC. CD spectra were used to investigate the secondary structure of OC. The largest differences were observed when the proteins were adsorbed onto silica versus calcium phosphate surfaces. Similar amounts (3-4 at. % N) of hOC and dhOC were adsorbed onto the silica surface. Higher amounts of hOC and dhOC were adsorbed on all the calcium phosphate surfaces. The ToF-SIMS data showed that the intensity of the Cys amino acid fragment, normalized to intensity of all amino acid fragments, was significantly higher (∼×10) when the proteins were adsorbed onto silica. Since in the native OC structure the cysteines are located in the center of three α-helices, this indicates both hOC and dhOC are more denatured on the silica surface. As hOC and dhOC denature upon adsorption to the silica surface, the cysteines become more exposed and are more readily detected by ToF-SIMS. No significant differences were detected between hOC and dhOC adsorbed onto the silica surface, but small differences were observed between hOC and dhOC adsorbed onto the calcium phosphate surfaces. In the OC structure, the α-3 helix is located above the α-1 and α-2 helices. Small differences in the ToF-SIMS intensities from amino acid fragments characteristic of each helical unit (Asn for α-1; His for α-2; and Phe for α-3) suggests either slight changes in the orientation or a slight uncovering of the α-1 and α-2 for adsorbed dhOC. XPS showed that similar amounts of hOC and dhOC were absorbed onto hydroxyapaptite and octacalcium phosphate surfaces, but ToF-SIMS detected some small differences in the amino acid fragment intensities on these surfaces for adsorbed hOC and dhOC.

Indexed as

Calcium PhosphatesHumansOsteocalcinPhotoelectron SpectroscopyProtein Structure, SecondarySilicon DioxideSpectrometry, Mass, Secondary IonSurface PropertiesCalcium PhosphatesOsteocalcinSilicon Dioxide

Identifiers

PMID28521505
PMCPMC5436982
OpenAlexW2615611395

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.