Evidence map›Paper›PMID 28516903›Full record

ArticleNature communications2017

Molecular mechanism of Gαi activation by non-GPCR proteins with a Gα-Binding and Activating motif.

Alain Ibáñez de Opakua, Kshitij Parag-Sharma, Vincent DiGiacomo, Nekane Merino, Anthony Leyme, Arthur Marivin, Maider Villate, Lien T Nguyen, Miguel Angel de la Cruz-Morcillo, Juan B Blanco-Canosa and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. G protein regulation by RGS proteins in the pathophysiology of dilated cardiomyopathy.American journal of physiology. Heart and circulatory physiology · 2025
    Review
  4. Review
  5. Design, synthesis, and analysis of macrobicyclic peptides for targeting the Gαi protein.Journal of peptide science : an official publication of the European Peptide Society · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Small-molecule targeting of GPCR-independent noncanonical G-protein signaling in cancer.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Role of G-Proteins and GPCRs in Cardiovascular Pathologies.Bioengineering (Basel, Switzerland) · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Receptor tyrosine kinases activate heterotrimeric G proteins via phosphorylation within the interdomain cleft of Gαi.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Do All Roads Lead to Rome in G-Protein Activation?Trends in biochemical sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Alain Ibáñez de OpakuaCIC bioGUNE, 48160 Derio, Spain.
Kshitij Parag-SharmaDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Vincent DiGiacomoDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Nekane MerinoCIC bioGUNE, 48160 Derio, Spain.ORCID 0000-0003-0721-4813
Anthony LeymeDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Arthur MarivinDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Maider VillateCIC bioGUNE, 48160 Derio, Spain.
Lien T NguyenDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Miguel Angel de la Cruz-MorcilloDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Juan B Blanco-CanosaDepartment of Chemistry and Molecular Pharmacology, IRB Barcelona, 08028 Barcelona, Spain.
Sekar RamachandranDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA.
George S BaillieInstitute of Cardiovascular and Medical Sciences, Department of Molecular Pharmacology, University of Glasgow, Glasgow G12 8QQ, UK.
Richard A CerioneDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA.
Francisco J BlancoCIC bioGUNE, 48160 Derio, Spain.ORCID 0000-0003-2545-4319
Mikel Garcia-MarcosDepartment of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02118, USA.

Funding

Alternative mechanisms of signaling via trimeric G proteinsR01GM108733 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GARCIA-MARCOS, MIKEL · 2014 to 2018
$1.6M
Identification of chemical probes that specifically disrupt the GIV-Gi interfaceR01GM112631 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GARCIA-MARCOS, MIKEL · 2015 to 2017
$933k
NIGMS NIH HHS R01 GM108733NIGMS NIH HHS R01 GM112631
6 · The paper itself

Abstract

Heterotrimeric G proteins are quintessential signalling switches activated by nucleotide exchange on Gα. Although activation is predominantly carried out by G-protein-coupled receptors (GPCRs), non-receptor guanine-nucleotide exchange factors (GEFs) have emerged as critical signalling molecules and therapeutic targets. Here we characterize the molecular mechanism of G-protein activation by a family of non-receptor GEFs containing a Gα-binding and -activating (GBA) motif. We combine NMR spectroscopy, computational modelling and biochemistry to map changes in Gα caused by binding of GBA proteins with residue-level resolution. We find that the GBA motif binds to the SwitchII/α3 cleft of Gα and induces changes in the G-1/P-loop and G-2 boxes (involved in phosphate binding), but not in the G-4/G-5 boxes (guanine binding). Our findings reveal that G-protein-binding and activation mechanisms are fundamentally different between GBA proteins and GPCRs, and that GEF-mediated perturbation of nucleotide phosphate binding is sufficient for Gα activation.

Indexed as

Amino Acid MotifsCell LineEnzyme ActivationGTP-Binding Protein alpha Subunits, Gi-GoGuanosine DiphosphateHEK293 CellsHumansMicrofilament ProteinsNuclear Magnetic Resonance, BiomolecularProtein BindingReceptors, G-Protein-CoupledSignal TransductionVesicular Transport ProteinsCCDC88A protein, humanGNAI3 protein, humanGTP-Binding Protein alpha Subunits, Gi-GoGuanosine DiphosphateMicrofilament ProteinsReceptors, G-Protein-CoupledVesicular Transport Proteins

Identifiers

PMID28516903
PMCPMC5454376

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.