Evidence map›Paper›PMID 28515796›Full record

ArticleClinical epigenetics2017

Genetic heterogeneity of patients with suspected Silver-Russell syndrome: genome-wide copy number analysis in 82 patients without imprinting defects.

Takanobu Inoue, Akie Nakamura, Tomoko Fuke, Kazuki Yamazawa, Shinichiro Sano, Keiko Matsubara, Seiji Mizuno, Yoshika Matsukura, Chie Harashima, Tatsuji Hasegawa and 7 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. A long way to syndromic short stature.Italian journal of pediatrics · 2024
    Article
  4. Approach to the Patient With Suspected Silver-Russell Syndrome.The Journal of clinical endocrinology and metabolism · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 1 country.

Takanobu InoueDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Akie NakamuraDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Tomoko FukeDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Kazuki YamazawaDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Shinichiro SanoDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Keiko MatsubaraDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Seiji MizunoDepartment of Pediatrics, Central Hospital, Aichi Human Service Center, 713-8 Kagiya-cho, Kasugai, Aichi 480-0392 Japan.
Yoshika MatsukuraDepartment of Pediatrics, The Japan Baptist Hospital, 47 Yamanomoto-cho, Kitashirakawa, Sakyo-ku, Kyoto, 606-8273 Japan.
Chie HarashimaDepartment of Pediatrics, The Japan Baptist Hospital, 47 Yamanomoto-cho, Kitashirakawa, Sakyo-ku, Kyoto, 606-8273 Japan.
Tatsuji HasegawaDepartment of Pediatrics, Kyoto Prefectural University of Medicine, 465 Kajii-cho, Kamigyo-ku, Kyoto, 602-8566 Japan.
Hisakazu NakajimaDepartment of Pediatrics, Kyoto Prefectural University of Medicine, 465 Kajii-cho, Kamigyo-ku, Kyoto, 602-8566 Japan.
Kumi TsumuraTsumura Family Clinic, Kumi Shounika, 858-1 Watarihashi-cho, Izumo, Shimane 693-0004 Japan.
Zenro KizakiDepartment of Pediatrics, Japanese Red Cross Kyoto Daiichi Hospital, 15-749 Honmachi Higashiyama-ku, Kyoto, 605-0981 Japan.
Akira OkaDepartment of Pediatrics, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8655 Japan.
Tsutomu OgataDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Maki FukamiDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
Masayo KagamiDepartment of Molecular Endocrinology, National Research Institute for Child Health and Development, 2-10-1, Okura Setagaya-ku, Tokyo, 157-8535 Japan.
National Center For Child Health and Development · JPKyoto Prefectural University of Medicine · JPAichi Human Service Center · JPHamamatsu University School of Medicine · JPKyoto first Red Cross hospital · JPTsumura Research Institute (Japan) · JPUniversity of Tokyo Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSilver-Russell syndrome (SRS) is a rare congenital disorder characterized by pre- and postnatal growth failure and dysmorphic features. Recently, pathogenic copy number variations (PCNVs) and imprinting defects other than hypomethylation of the

methodsWe performed array comparative genomic hybridization analysis using a catalog array for 54 patients satisfying the Netchine-Harbison clinical scoring system (NH-CSS) (SRS-compatible) and for 28 patients presenting with three NH-CSS items together with triangular face and/or fifth finger clinodactyly and/or brachydactyly (SRS-like) without abnormal methylation levels of 9 DMRs related to known imprinting disorders. We then investigated the clinical features of patients with PCNVs.

resultsThree of the 54 SRS-compatible patients (5.6%) and 2 of the 28 SRS-like patients (7.1%) had PCNVs. We detected 3.5 Mb deletion in 4p16.3, mosaic trisomy 18, and 3.77-4.00 Mb deletion in 19q13.11-12 in SRS-compatible patients, and 1.41-1.97 Mb deletion in 7q11.23 in both SRS-like patients. Congenital heart diseases (CHDs) were identified in two patients and moderate to severe global developmental delay was observed in four patients.

conclusionsOf the patients in our study, 5.6% of SRS-compatible and 7.1% of SRS-like patients had PCNVs. All PCNVs have been previously reported for genetic causes of contiguous deletion syndromes or mosaic trisomy 18. Our study suggests patients with PCNVs, who have a phenotype resembling SRS, show a high tendency towards CHDs and/or apparent developmental delay.

Indexed as

DNA Copy Number VariationsChildChild, PreschoolComparative Genomic HybridizationDevelopmental DisabilitiesDNA MethylationEpigenesis, GeneticFemaleGenetic HeterogeneityGenomic ImprintingHeart DiseasesHumansInfantMaleSilver-Russell SyndromeYoung Adult19q13.11 deletion syndrome4p microdeletion syndromeArray comparative genomic hybridizationMosaic trisomy 18Netchine-Harbison clinical scoring systemPathogenic copy number variationSilver-Russell syndromeWilliams syndrome

Identifiers

PMID28515796
PMCPMC5433143
OpenAlexW2613803713

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.