Evidence map›Paper›PMID 28515313›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Low temperature nullifies the circadian clock in cyanobacteria through Hopf bifurcation.

Yoriko Murayama, Hiroshi Kori, Chiaki Oshima, Takao Kondo, Hideo Iwasaki, Hiroshi Ito

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
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  4. Intrinsic period stability of the cyanobacterial circadian oscillator across in vitro and in vivo conditions.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  16. The seasons within: a theoretical perspective on photoperiodic entrainment and encoding.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2024
    Review
  17. Temperature compensation through kinetic regulation in biochemical oscillators.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Yoriko MurayamaFaculty of Design, Kyushu University, Fukuoka, 815-8540, Japan.
Hiroshi KoriDepartment of Information Sciences, Ochanomizu University, Tokyo 112-8610, Japan; hito@design.kyushu-u.ac.jp kori.hiroshi@ocha.ac.jp.
Chiaki OshimaFaculty of Design, Kyushu University, Fukuoka, 815-8540, Japan.
Takao KondoDivision of Biological Science, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Hideo IwasakiDepartment of Electrical Engineering and Bioscience, Graduate School of Sciences and Engineering, Waseda University, TWIns, Tokyo 162-8480, Japan.
Hiroshi ItoFaculty of Design, Kyushu University, Fukuoka, 815-8540, Japan; hito@design.kyushu-u.ac.jp kori.hiroshi@ocha.ac.jp.ORCID 0000-0002-7220-6011
Kyushu University · JPNagoya University · JPOchanomizu University · JPWaseda University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cold temperatures lead to nullification of circadian rhythms in many organisms. Two typical scenarios explain the disappearance of rhythmicity: the first is oscillation death, which is the transition from self-sustained oscillation to damped oscillation that occurs at a critical temperature. The second scenario is oscillation arrest, in which oscillation terminates at a certain phase. In the field of nonlinear dynamics, these mechanisms are called the Hopf bifurcation and the saddle-node on an invariant circle bifurcation, respectively. Although these mechanisms lead to distinct dynamical properties near the critical temperature, it is unclear to which scenario the circadian clock belongs. Here we reduced the temperature to dampen the reconstituted circadian rhythm of phosphorylation of the recombinant cyanobacterial clock protein KaiC. The data led us to conclude that Hopf bifurcation occurred at ∼19 °C. Below this critical temperature, the self-sustained rhythms of KaiC phosphorylation transformed to damped oscillations, which are predicted by the Hopf bifurcation theory. Moreover, we detected resonant oscillations below the critical temperature when temperature was periodically varied, which was reproduced by numerical simulations. Our findings suggest that the transition to a damped oscillation through Hopf bifurcation contributes to maintaining the circadian rhythm of cyanobacteria through resonance at cold temperatures.

Indexed as

Cold TemperatureBacterial ProteinsCircadian ClocksCircadian RhythmCircadian Rhythm Signaling Peptides and ProteinsCyanobacteriaPhosphorylationBacterial ProteinsCircadian Rhythm Signaling Peptides and ProteinsKaiC protein, cyanobacteriacircadian rhythmscyanobacteriaHopf bifurcationin vitrolow temperature

Identifiers

PMID28515313
PMCPMC5465896
OpenAlexW2615599503

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.