Evidence map›Paper›PMID 28515050›Full record

ArticleG3 (Bethesda, Md.)2017

The Mapping of Predicted Triplex DNA:RNA in the

Claude Pasquier, Sandra Agnel, Alain Robichon

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Claude PasquierUniversité Côte d'Azur, CNRS, I3S, France claude.pasquier@unice.fr.ORCID 0000-0001-7498-395X
Sandra AgnelUniversité Côte d'Azur, INRA, CNRS, ISA, France.
Alain RobichonUniversité Côte d'Azur, INRA, CNRS, ISA, France.
Centre National de la Recherche Scientifique · FRObservatoire de la Côte d’Azur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Double-stranded DNA is able to form triple-helical structures by accommodating a third nucleotide strand. A nucleic acid triplex occurs according to Hoogsteen rules that predict the stability and affinity of the third strand bound to the Watson-Crick duplex. The "triplex-forming oligonucleotide" (TFO) can be a short sequence of RNA that binds to the major groove of the targeted duplex only when this duplex presents a sequence of purine or pyrimidine bases in one of the DNA strands. Many nuclear proteins are known to bind triplex DNA or DNA:RNA, but their biological functions are unexplored. We identified sequences that are capable of engaging as the "triplex-forming oligonucleotide" in both the pre-lncRNA and pre-mRNA collections of

Indexed as

Genes, InsectRNAAnimalsDNADrosophila melanogasterGene Regulatory NetworksMorphogenesisNucleic Acid HeteroduplexesDNANucleic Acid HeteroduplexesRNAdevelopmentepigeneticsgene networksHoogsteen rulestriplex DNA:RNA

Identifiers

PMID28515050
PMCPMC5499136
OpenAlexW2614906408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.