Evidence map›Paper›PMID 28512091›Full record

ArticlemBio2017

Conformational Flexibility in the Immunoglobulin-Like Domain of the Hepatitis C Virus Glycoprotein E2.

Ieva Vasiliauskaite, Ania Owsianka, Patrick England, Abdul Ghafoor Khan, Sarah Cole, Dorothea Bankwitz, Steven K H Foung, Thomas Pietschmann, Joseph Marcotrigiano, Felix A Rey and 2 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Design of a native-like secreted form of the hepatitis C virus E1E2 heterodimer.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. HCV Glycoprotein Structure and Implications for B-Cell Vaccine Development.International journal of molecular sciences · 2020
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Improving the aqueous solubility of HCV-E2 glycoprotein epitope mimics by cyclization using POLAR hinges.Journal of peptide science : an official publication of the European Peptide Society · 2020
    Article
  18. Article
  19. Article
  20. Synergistic anti-HCV broadly neutralizing human monoclonal antibodies with independent mechanisms.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Ieva VasiliauskaiteUnité de Virologie Structurale, Department Virologie, Institut Pasteur, Paris, France.
Ania OwsiankaMRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom.
Patrick EnglandPlate-Forme de Biophysique Moléculaire, Institut Pasteur, Paris, France.
Abdul Ghafoor KhanCenter for Advanced Biotechnology and Medicine, Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, New Jersey, USA.
Sarah ColeMRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom.
Dorothea BankwitzInstitute for Experimental Virology, Centre for Experimental and Clinical Infection Research, Twincore, Hannover, Germany.
Steven K H FoungDepartment of Pathology, Stanford University School of Medicine, Stanford, California, USA.
Thomas PietschmannInstitute for Experimental Virology, Centre for Experimental and Clinical Infection Research, Twincore, Hannover, Germany.ORCID 0000-0001-6789-4422
Joseph MarcotrigianoCenter for Advanced Biotechnology and Medicine, Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, New Jersey, USA.
Felix A ReyUnité de Virologie Structurale, Department Virologie, Institut Pasteur, Paris, France.
Arvind H PatelMRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom arvind.patel@glasgow.ac.uk krey.thomas@mh-hannover.de.
Thomas KreyUnité de Virologie Structurale, Department Virologie, Institut Pasteur, Paris, France arvind.patel@glasgow.ac.uk krey.thomas@mh-hannover.de.
Centre National de la Recherche Scientifique · FRMRC University of Glasgow Centre for Virus Research · GBRutgers, The State University of New Jersey · USCenter for Experimental and Clinical Infection Research · DEGerman Center for Infection Research · DEStanford University · US

Funding

Entry and replication of positive-sense, RNA virusesZIAAI001217 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI MARCOTRIGIANO, JOSEPH · 2017 to 2025
$11.0M
Project 2 - FranceU19AI123862 · NIAID · STANFORD UNIVERSITY · PI FOUNG, STEVEN · 2016 to 2020
$3.9M
Medical Research Council MC_U130184144Medical Research Council MC_UU_12014/2NIAID NIH HHS U19 AI123862
6 · The paper itself

Abstract

The hepatitis C virus (HCV) glycoprotein E2 is the major target of neutralizing antibodies and is therefore highly relevant for vaccine design. Its structure features a central immunoglobulin (Ig)-like β-sandwich that contributes to the binding site for the cellular receptor CD81. We show that a synthetic peptide corresponding to a β-strand of this Ig-like domain forms an α-helix in complex with the anti-E2 antibody DAO5, demonstrating an inside-out flip of hydrophobic residues and a secondary structure change in the composite CD81 binding site. A detailed interaction analysis of DAO5 and cross-competing neutralizing antibodies with soluble E2 revealed that the Ig-like domain is trapped by different antibodies in at least two distinct conformations. DAO5 specifically captures retrovirus particles bearing HCV glycoproteins (HCVpp) and infectious cell culture-derived HCV particles (HCVcc). Infection of cells by DAO5-captured HCVpp can be blocked by a cross-competing neutralizing antibody, indicating that a single virus particle simultaneously displays E2 molecules in more than one conformation on its surface. Such conformational plasticity of the HCV E2 receptor binding site has important implications for immunogen design.

Indexed as

Immunoglobulin DomainsAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralBinding SitesCrystallography, X-RayEpitopesHEK293 CellsHepacivirusHepatitis CHumansProtein BindingProtein ConformationTetraspanin 28Viral Envelope ProteinsViral Hepatitis VaccinesAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralEpitopesglycoprotein E2, Hepatitis C virusTetraspanin 28Viral Envelope ProteinsViral Hepatitis VaccinesCD81 binding siteconformational flexibilityglycoprotein E2hepatitis C virusIg-like domainmonoclonal antibodiesvaccine design

Identifiers

PMID28512091
PMCPMC5433095
OpenAlexW2614788581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.