Evidence map›Paper›PMID 28510874›Full record

ArticleBotanical studies2013

The NPR1 ortholog PhaNPR1 is required for the induction of PhaPR1 in Phalaenopsis aphrodite.

Jen-Chih Chen, Hsiang-Chia Lu, Cheng-En Chen, Hua-Fang Hsu, Hong-Hwa Chen, Hsin-Hung Yeh

Open access · goldAbstract read
In one paragraph

Article in Botanical studies, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification and Characterization of NPR1 and PR1 Homologs inInternational journal of molecular sciences · 2020
    Article
  4. Article
  5. Silencing ofFrontiers in plant science · 2019
    Article
  6. Review
  7. Cloning, Overexpression andIranian journal of biotechnology · 2017
    Article
  8. Signal regulators of systemic acquired resistance.Frontiers in plant science · 2015
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jen-Chih ChenInstitute of Biotechnology, National Taiwan University, Taipei 106, Taiwan, ROC.
Hsiang-Chia LuDepartment of Plant Pathology and Microbiology, National Taiwan University, 1, sec 4, Rooselvet Road, Taipei, 106, Taiwan.
Cheng-En ChenDepartment of Plant Pathology and Microbiology, National Taiwan University, 1, sec 4, Rooselvet Road, Taipei, 106, Taiwan.
Hua-Fang HsuDepartment of Plant Pathology and Microbiology, National Taiwan University, 1, sec 4, Rooselvet Road, Taipei, 106, Taiwan.
Hong-Hwa ChenDepartment of Life Sciences, National Cheng Kung University, Tainan, 701, Taiwan.
Hsin-Hung YehDepartment of Plant Pathology and Microbiology, National Taiwan University, 1, sec 4, Rooselvet Road, Taipei, 106, Taiwan. hyeh@ntu.edu.tw.
National Taiwan University · TWNational Cheng Kung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSystematic acquired resistance (SAR) is an effective broad-spectrum defense mechanism that confers long-lasting protection against biotrophic pathogens trough defense related salicylic acid (SA) signaling. Gene(s) involved in SAR have been extensively studied in dicot plants; however, remains largely unresolved in monocot plants. NPR1, an evolutionary conserved gene, plays a central role in SAR, and PR-1 is widely used as a marker for effective SA signaling.

resultsWe identified NPR1 and PR-1 homologous genes, PhaNPR1 and PhaPR1, from an economically important orchid, Phalaenopsis aphrodite, and characterized their roles in SA signaling and Cymbidium mosaic virus (CymMV) resistance. A phylogenetic analysis of NPR1 homologs showed that these genes appear to have evolved before angiospermy. Similar to Arabidopsis NPR1, PhaNPR1 was only moderately induced upon SA treatment and CymMV infection. Although PhaPR1 shows only 36% identity with AtPR1, its promoter shared conserved elements with those of other PR-1 genes, and it was induced upon SA treatment and CymMV infection. After CymMV infection, silencing on PhaNPR1 also reduced PhaPR1 expression; however, CymMV accumulation was not affected.

conclusionsIn conclusion, after virus infection, PhaNPR1 is required for PhaPR1 induction, but plays little role in defense against CymMV.

Indexed as

NPR1Phalaenopsis aphroditePR1Salicylic acidSystemic acquired resistance

Identifiers

PMID28510874
PMCPMC5432770
OpenAlexW2172072530

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.