Evidence map›Paper›PMID 28510871›Full record

ArticleBotanical studies2013

Lemon protein disulfide isomerase: cDNA cloning and biochemical characterization.

Yu-Ting Chen, Lisa Wen, Kuo-Chuan Ho, Rong-Huay Juang, Chi-Tsai Lin

Open access · goldAbstract read
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Article in Botanical studies, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Yu-Ting ChenInstitute of Genomics and Bioinformatics, Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan.
Lisa WenDepartment of Chemistry, Western Illinois University, 1 University Circle, Macomb, IL, 61455-1390, USA.
Kuo-Chuan HoInstitute of Bioscience and Biotechnology and Center of Excellence for the Oceans, National Taiwan Ocean University, 2 Pei-Ning Rd, Keelung, 202, Taiwan.
Rong-Huay JuangDepartment of Biochemical Science and Technology, National Taiwan University, Taipei, 106, Taiwan.
Chi-Tsai LinInstitute of Bioscience and Biotechnology and Center of Excellence for the Oceans, National Taiwan Ocean University, 2 Pei-Ning Rd, Keelung, 202, Taiwan. B0220@mail.ntou.edu.tw.
National Taiwan Ocean University · TWNational Chung Hsing University · TWNational Taiwan University · TWWestern Illinois University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProtein disulfide isomerases (PDIs), a family of structurally related enzymes, aid in protein folding by catalyzing disulfide bonds formation, breakage, or isomerization in newly synthesized proteins and thus.

resultsA ClPDI cDNA (1828 bp, GenBank accession HM641784) encoding a putative PDI from Citrus limonum was cloned by polymerase chain reaction (PCR). The DNA sequence encodes a protein of 500 amino acids with a calculated molecular mass of 60.5 kDa. The deduced amino acid sequence is conserved among the reported PDIs. A 3-D structural model of the ClPDI has been created based on the known crystal structure of Homo sapiens (PDB ID: 3F8U_A). The enzyme has two putative active sites comprising the redox-active disulfides between residues 60-63 and 405-408 (motif CGHC). To further characterize the ClPDI, the coding region was subcloned into an expression vector pET-20b (+), transformed into E. coli Rosetta (DE3)pLysS, and recombinant protein expressed. The recombinant ClPDI was purified by a nickel Sepharose column. PDI's activity was assayed based on the ability of the enzyme to isomerize scrambled RNase A (sRNase A) to active enzyme. The K

conclusionsThe advantage of this enzyme over the PDI from all other sources is its low K

Indexed as

Citrus limonumProtein disulfide isomerase (PDI)Scrambled RNase A (sRNase A)Three-dimension structural model (3-D structural model)

Identifiers

PMID28510871
PMCPMC5432843
OpenAlexW2103521980

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.