Evidence map›Paper›PMID 28510424›Full record

ArticleJournal of the American Chemical Society2017

Structure-Dependent Binding of hnRNPA1 to Telomere RNA.

Xiao Liu, Takumi Ishizuka, Hong-Liang Bao, Kei Wada, Yuma Takeda, Keisuke Iida, Kazuo Nagasawa, Danzhou Yang, Yan Xu

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Article
  3. hnRNP A1 induces aberrantLife science alliance · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. [Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. hnRNP A1B, a Splice Variant ofFrontiers in neuroscience · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Xiao LiuDivision of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki , 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.
Takumi IshizukaDivision of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki , 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.
Hong-Liang BaoDivision of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki , 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.
Kei WadaOrganization for Promotion of Tenure Track, University of Miyazaki , 1-1 Gakuenkibanadai-nishi, Kiyotake, Miyazaki 889-2192, Japan.
Yuma TakedaDivision of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki , 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.
Keisuke IidaDepartment of Biotechnology and Life Science, Tokyo University of Agriculture and Technology , 2-24-16 Naka-cho, Koganei City, Tokyo 184-8588, Japan.
Kazuo NagasawaDepartment of Biotechnology and Life Science, Tokyo University of Agriculture and Technology , 2-24-16 Naka-cho, Koganei City, Tokyo 184-8588, Japan.ORCID 0000-0002-0437-948X
Danzhou YangDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy, Purdue University , 201 South University Street, West Lafayette, Indiana 47907, United States.
Yan XuDivision of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki , 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.ORCID 0000-0003-0379-8866
University of Miyazaki · JPTokyo University of Agriculture and Technology · JPPurdue University West Lafayette · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI John Tesmer · 1985 to 2026
$43.4M
Targeting MYC promoter G-quadruplex for MYC inhibition by IndenoisoquinolinesR01CA177585 · NCI · UNIVERSITY OF ARIZONA · PI SINTIM, HERMAN O, YANG, DANZHOU · 2014 to 2025
$4.0M
G-quadruplexes formed in human oncogene promoters and their drug complexesR01CA122952 · NCI · UNIVERSITY OF ARIZONA · PI YANG, DANZHOU · 2007 to 2011
$875k
NCI NIH HHS P30 CA023168NCI NIH HHS R01 CA122952NCI NIH HHS R01 CA177585
6 · The paper itself

Abstract

Telomeric repeat-containing RNA is a new noncoding RNA molecule that performs various biofunctions. Heterogeneous nuclear ribonucleoprotein (hnRNP) A1 is an RNA-binding protein involved in the telomere maintenance machinery. To date, little is known about how hnRNPA1 binds to telomeric RNA. In this study, we investigated the binding affinity and recognition mechanism of telomere RNA with the RNA recognition motif of hnRNPA1. Using the photochemical cross-linking method, we showed that the telomere RNA G-quadruplex with loops is important in the interaction of telomere RNA with hnRNPA1. Using small-molecule probes, we directly visualized the complex formed by the telomere RNA G-quadruplex and hnRNPA1 in vitro and in live cells. The results suggested that the structure-dependent binding of hnRNPA1 to telomere RNA regulates the telomere function. Therefore, our study provides new insights into the interactions between the RNA G-quadruplex and proteins at the telomere.

Indexed as

G-QuadruplexesCross-Linking ReagentsFluorescent Antibody TechniqueHeLa CellsHumansMagnetic Resonance SpectroscopyMicroscopy, FluorescenceModels, BiologicalMolecular StructurePhotochemistryProtein BindingRNASmall Molecule LibrariesStructure-Activity RelationshipSubstrate SpecificityTelomeraseCross-Linking ReagentsRNASmall Molecule LibrariesTelomerase

Identifiers

PMID28510424
PMCPMC5977995
OpenAlexW2614278639

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.