Evidence map›Paper›PMID 28509880›Full record

ArticleInternational journal of molecular sciences2017

Analysis of Different Approaches for the Selection of Reference Genes in RT-qPCR Experiments: A Case Study in Skeletal Muscle of Growing Mice.

Verónica G Piazza, Andrzej Bartke, Johanna G Miquet, Ana I Sotelo

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Verónica G PiazzaUniversidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Química y Fisicoquímica Biológicas (IQUIFIB), Facultad de Farmacia y Bioquímica, Buenos Aires C1113AAD, Argentina. vpiazza@qb.ffyb.uba.ar.
Andrzej BartkeDepartment of Internal Medicine and Physiology, Division of Geriatric Research, School of Medicine, Southern Illinois University, Springfield, IL 62794-9628, USA. abartke@siumed.edu.
Johanna G MiquetUniversidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Química y Fisicoquímica Biológicas (IQUIFIB), Facultad de Farmacia y Bioquímica, Buenos Aires C1113AAD, Argentina. jmiquet@qb.ffyb.uba.ar.
Ana I SoteloUniversidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Química y Fisicoquímica Biológicas (IQUIFIB), Facultad de Farmacia y Bioquímica, Buenos Aires C1113AAD, Argentina. aisotelo@qb.ffyb.uba.ar.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARInstituto de Química y Fisicoquímica Biológicas · ARSouthern Illinois University School of Medicine · USUniversity of Buenos Aires · AR

Funding

Longevity genes and calorie restriction: early post-natal effectsR01AG019899 · NIA · SOUTHERN ILLINOIS UNIVERSITY SCH OF MED · PI BARTKE, ANDRZEJ · 2001 to 2016
$6.1M
NIA NIH HHS R01 AG019899
6 · The paper itself

Abstract

The reliability of reverse transcription-quantitative PCR (RT-qPCR) results in gene expression studies depends on the approaches used to account for non-biological variations. In order to find a proper normalization strategy for the study of genes related to growth hormone signaling in skeletal muscle of growing mice, nine unrelated genes were evaluated as internal controls. According to the most used algorithms-geNorm, the Comparative Δ

Indexed as

Gene Expression ProfilingGenetic MarkersReal-Time Polymerase Chain ReactionAnimalsGene ExpressionGene Expression RegulationGrowth HormoneMiceMuscle, SkeletalReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionGenetic MarkersGrowth Hormonedilution effectgrowing micegrowth hormoneisolated messenger RNAnormalization strategyreference genesreverse transcription-quantitative PCRsignal transductionskeletal muscletotal RNA

Identifiers

PMID28509880
PMCPMC5454972
OpenAlexW2615422988

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.