Evidence map›Paper›PMID 28508049›Full record

ArticleScience advances2017

Mechanism and color modulation of fungal bioluminescence.

Zinaida M Kaskova, Felipe A Dörr, Valentin N Petushkov, Konstantin V Purtov, Aleksandra S Tsarkova, Natalja S Rodionova, Konstantin S Mineev, Elena B Guglya, Alexey Kotlobay, Nadezhda S Baleeva and 16 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Diversity, Distribution, and Evolution of Bioluminescent Fungi.Journal of fungi (Basel, Switzerland) · 2024
    Review
  9. Glowing wonders: exploring the diversity and ecological significance of bioluminescent organisms in Brazil.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Review
  10. Article
  11. Review
  12. Journal of fungi (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Article
  15. The Luminous Fungi of Japan.Journal of fungi (Basel, Switzerland) · 2023
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 7 institutions in 3 countries.

Zinaida M KaskovaInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Felipe A DörrDepartamento de Análises Clínicas e Toxicológicas, Faculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, 05508-900, Brazil.ORCID 0000-0003-4207-4908
Valentin N PetushkovInstitute of Biophysics Siberian Branch of Russian Academy of Sciences (SB RAS), Federal Research Center "Krasnoyarsk Science Center SB RAS," Akademgorodok, Krasnoyarsk 660036, Russia.
Konstantin V PurtovInstitute of Biophysics Siberian Branch of Russian Academy of Sciences (SB RAS), Federal Research Center "Krasnoyarsk Science Center SB RAS," Akademgorodok, Krasnoyarsk 660036, Russia.
Aleksandra S TsarkovaInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.ORCID 0000-0001-9269-2160
Natalja S RodionovaInstitute of Biophysics Siberian Branch of Russian Academy of Sciences (SB RAS), Federal Research Center "Krasnoyarsk Science Center SB RAS," Akademgorodok, Krasnoyarsk 660036, Russia.
Konstantin S MineevInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.ORCID 0000-0002-2418-9421
Elena B GuglyaPirogov Russian National Research Medical University, Ostrovitianov 1, Moscow 117997, Russia.
Alexey KotlobayInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Nadezhda S BaleevaInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Mikhail S BaranovInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Alexander S ArsenievInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Josef I GitelsonInstitute of Biophysics Siberian Branch of Russian Academy of Sciences (SB RAS), Federal Research Center "Krasnoyarsk Science Center SB RAS," Akademgorodok, Krasnoyarsk 660036, Russia.
Sergey LukyanovInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.
Yoshiki SuzukiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0003-4072-8170
Shusei KanieGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Ernani PintoDepartamento de Análises Clínicas e Toxicológicas, Faculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, 05508-900, Brazil.ORCID 0000-0001-7614-3014
Paolo Di MascioDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.
Hans E WaldenmaierDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.ORCID 0000-0002-9858-3472
Tatiana A PereiraDepartamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.ORCID 0000-0001-9890-0581
Rodrigo P CarvalhoDepartamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.
Anderson G OliveiraDepartamento de Oceanografia Física, Química e Geológica, Instituto Oceanográfico, Universidade de São Paulo, 05508-120, Brazil.
Yuichi ObaDepartment of Environmental Biology, Chubu University, Kasugai 487-8501, Japan.
Erick L BastosDepartamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.ORCID 0000-0002-0592-9455
Cassius V StevaniDepartamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, 05508-000, Brazil.
Ilia V YampolskyInstitute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya 16/10, Moscow 117997, Russia.ORCID 0000-0003-2558-2476
Pirogov Russian National Research Medical University · RUUniversidade de São Paulo · BRKrasnoyarsk Scientific Center · RUInstitute of Bioorganic Chemistry · RUInstituto de Ciências Farmacêuticas · BRNagoya University · JPChubu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bioluminescent fungi are spread throughout the globe, but details on their mechanism of light emission are still scarce. Usually, the process involves three key components: an oxidizable luciferin substrate, a luciferase enzyme, and a light emitter, typically oxidized luciferin, and called oxyluciferin. We report the structure of fungal oxyluciferin, investigate the mechanism of fungal bioluminescence, and describe the use of simple synthetic α-pyrones as luciferins to produce multicolor enzymatic chemiluminescence. A high-energy endoperoxide is proposed as an intermediate of the oxidation of the native luciferin to the oxyluciferin, which is a pyruvic acid adduct of caffeic acid. Luciferase promiscuity allows the use of simple α-pyrones as chemiluminescent substrates.

Indexed as

LuminescenceFungal ProteinsFungiIndolesLuciferasesPyrazinesPyronesFungal ProteinsIndolesLuciferasesoxyluciferinPyrazinesPyronesalpha-pyronechemiluminescenceCIEELendoperoxideenzyme promiscuityhispidinluciferaseluciferinNeonothopanusphotochemistry

Identifiers

PMID28508049
PMCPMC5406138
OpenAlexW2609589258

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.