Evidence map›Paper›PMID 28507554›Full record

ArticleFrontiers in plant science2017

Large Differences in Gene Expression Responses to Drought and Heat Stress between Elite Barley Cultivar Scarlett and a Spanish Landrace.

Carlos P Cantalapiedra, María J García-Pereira, María P Gracia, Ernesto Igartua, Ana M Casas, Bruno Contreras-Moreira

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
12.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 70 citations in OpenAlex.

  1. Pooled it
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  18. The barleyFrontiers in genetics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Carlos P CantalapiedraDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
María J García-PereiraDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
María P GraciaDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
Ernesto IgartuaDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
Ana M CasasDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
Bruno Contreras-MoreiraDepartment of Genetics and Plant Production, Estación Experimental de Aula Dei (CSIC)Zaragoza, Spain.
Estación Experimental de Aula Dei · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought causes important losses in crop production every season. Improvement for drought tolerance could take advantage of the diversity held in germplasm collections, much of which has not been incorporated yet into modern breeding. Spanish landraces constitute a promising resource for barley breeding, as they were widely grown until last century and still show good yielding ability under stress. Here, we study the transcriptome expression landscape in two genotypes, an outstanding Spanish landrace-derived inbred line (SBCC073) and a modern cultivar (Scarlett). Gene expression of adult plants after prolonged stresses, either drought or drought combined with heat, was monitored. Transcriptome of mature leaves presented little changes under severe drought, whereas abundant gene expression changes were observed under combined mild drought and heat. Developing inflorescences of SBCC073 exhibited mostly unaltered gene expression, whereas numerous changes were found in the same tissues for Scarlett. Genotypic differences in physiological traits and gene expression patterns confirmed the different behavior of landrace SBCC073 and cultivar Scarlett under abiotic stress, suggesting that they responded to stress following different strategies. A comparison with related studies in barley, addressing gene expression responses to drought, revealed common biological processes, but moderate agreement regarding individual differentially expressed transcripts. Special emphasis was put in the search of co-expressed genes and underlying common regulatory motifs. Overall, 11 transcription factors were identified, and one of them matched

Indexed as

barleydroughtgene expressionheatlandraceRNAseqtranscriptome profiling

Identifiers

PMID28507554
PMCPMC5410667
OpenAlexW2610970879

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.