Evidence map›Paper›PMID 28506462›Full record

ArticleMolecular cell2017

A Slow Conformational Switch in the BMAL1 Transactivation Domain Modulates Circadian Rhythms.

Chelsea L Gustafson, Nicole C Parsley, Hande Asimgil, Hsiau-Wei Lee, Christopher Ahlbach, Alicia K Michael, Haiyan Xu, Owen L Williams, Tara L Davis, Andrew C Liu and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 85 citations in OpenAlex.

  1. Review
  2. The CLOCK-BMAL1 complex in circadian regulation: structure, mechanisms, and therapeutic targeting.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. A tethering mechanism underlies Pin1-catalyzed prolineProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. iScience · 2025
    Article
  11. ProlineJournal of the American Chemical Society · 2025
    Article
  12. Article
  13. Article
  14. Temperature-dependent fold-switching mechanism of the circadian clock protein KaiB.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. Chaotic aging: intrinsically disordered proteins in aging-related processes.Cellular and molecular life sciences : CMLS · 2023
    Article
  18. Article
  19. Article
  20. Lighting up Nobel Prize-winning studies with protein intrinsic disorder.Cellular and molecular life sciences : CMLS · 2022
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Chelsea L GustafsonDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Nicole C ParsleyDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Hande AsimgilDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Hsiau-Wei LeeDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Christopher AhlbachDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Alicia K MichaelDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Haiyan XuDepartment of Biological Sciences, University of Memphis, Memphis, TN 38152, USA.
Owen L WilliamsDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Tara L DavisDepartment of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, PA 19104, USA.
Andrew C LiuDepartment of Biological Sciences, University of Memphis, Memphis, TN 38152, USA; Feinstone Genome Research Center, University of Memphis, Memphis, TN 38152, USA.
Carrie L PartchDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA; Center for Circadian Biology, University of California, San Diego, San Diego, CA 92093, USA. Electronic address: cpartch@ucsc.edu.
University of California, Santa Cruz · USUniversity of Memphis · USDrexel University · USUniversity of California, San Diego · US

Funding

Exploring the structural basis for 24-hour timekeeping in mammalsR01GM107069 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI PARTCH, CARRIE L · 2013 to 2020
$3.2M
Functional and structural characterization of spliceosomal cyclophilinsR00GM094293 · NIGMS · DREXEL UNIVERSITY · PI DAVIS, TARA L · 2012 to 2014
$738k
THERMO ELECTRON LTQ-FT MASS SPECTROMETERS10RR020939 · NCRR · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HOLMAN, THEODORE R · 2006 to 2006
$368k
Disruption of the circadian clock by a cancer/testis antigenF31CA189660 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI MICHAEL, ALICIA · 2014 to 2016
$112k
NCI NIH HHS F31 CA189660NCRR NIH HHS S10 RR020939NIGMS NIH HHS R00 GM094293NIGMS NIH HHS R01 GM107069
6 · The paper itself

Abstract

The C-terminal transactivation domain (TAD) of BMAL1 (brain and muscle ARNT-like 1) is a regulatory hub for transcriptional coactivators and repressors that compete for binding and, consequently, contributes to period determination of the mammalian circadian clock. Here, we report the discovery of two distinct conformational states that slowly exchange within the dynamic TAD to control timing. This binary switch results from cis/trans isomerization about a highly conserved Trp-Pro imide bond in a region of the TAD that is required for normal circadian timekeeping. Both cis and trans isomers interact with transcriptional regulators, suggesting that isomerization could serve a role in assembling regulatory complexes in vivo. Toward this end, we show that locking the switch into the trans isomer leads to shortened circadian periods. Furthermore, isomerization is regulated by the cyclophilin family of peptidyl-prolyl isomerases, highlighting the potential for regulation of BMAL1 protein dynamics in period determination.

Indexed as

Circadian ClocksCircadian RhythmAnimalsARNTL Transcription FactorsCell Line, TumorCyclophilinsDrosophila ProteinsHumansIsomerismMiceMutationPeriod Circadian ProteinsPhylogenyProlineProtein DomainsSignal TransductionARNTL Transcription FactorsBMAL1 protein, humanBmal1 protein, mouseCyclophilinscyc protein, DrosophilaDrosophila ProteinsPER2 protein, humanPer2 protein, mousePeriod Circadian ProteinsProlineTryptophancircadian rhythmscyclophilinscyclosporin ANMR spectroscopyproline isomerizationtranscriptional activation

Identifiers

PMID28506462
PMCPMC5484534
OpenAlexW2612682908

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.