Evidence map›Paper›PMID 28504678›Full record

ArticleNature chemical biology2017

A conserved threonine prevents self-intoxication of enoyl-thioester reductases.

Raoul G Rosenthal, Bastian Vögeli, Tristan Wagner, Seigo Shima, Tobias J Erb

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

  1. Enzymatic Conversion of COChemical reviews · 2023
    Review
  2. Uniform binding and negative catalysis at the origin of enzymes.Protein science : a publication of the Protein Society · 2022
    Article
  3. Article
  4. InhA, the enoyl-thioester reductase fromThe Journal of biological chemistry · 2018
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Raoul G RosenthalBiochemistry and Synthetic Biology of Microbial Metabolism Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Bastian VögeliBiochemistry and Synthetic Biology of Microbial Metabolism Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.ORCID http://orcid.org/0000-0001-7870-7311
Tristan WagnerMicrobial Protein Structure Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Seigo ShimaMicrobial Protein Structure Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Tobias J ErbBiochemistry and Synthetic Biology of Microbial Metabolism Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Max Planck Institute for Terrestrial Microbiology · DE

Funding

European Research Council 637675
6 · The paper itself

Abstract

Enzymes are highly specific biocatalysts, yet they can promote unwanted side reactions. Here we investigated the factors that direct catalysis in the enoyl-thioester reductase Etr1p. We show that a single conserved threonine is essential to suppress the formation of a side product that would otherwise act as a high-affinity inhibitor of the enzyme. Substitution of this threonine with isosteric valine increases side-product formation by more than six orders of magnitude, while decreasing turnover frequency by only one order of magnitude. Our results show that the promotion of wanted reactions and the suppression of unwanted side reactions operate independently at the active site of Etr1p, and that the active suppression of side reactions is highly conserved in the family of medium-chain dehydrogenases/reductases (MDRs). Our discovery emphasizes the fact that the active destabilization of competing transition states is an important factor during catalysis that has implications for the understanding and the de novo design of enzymes.

Indexed as

BiocatalysisCandida tropicalisDose-Response Relationship, DrugMitochondriaMolecular StructureOxidoreductases Acting on CH-CH Group DonorsStructure-Activity RelationshipThreonineOxidoreductases Acting on CH-CH Group DonorsThreoninetrans-2-enoyl-CoA reductase (NADPH)

Identifiers

PMID28504678
PMCPMC5892710
OpenAlexW2615787203

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.