Evidence map›Paper›PMID 28501989›Full record

ArticleCurrent genetics2017

Negative control of Candida albicans filamentation-associated gene expression by essential protein kinase gene KIN28.

C A Woolford, K Lagree, T Aleynikov, A P Mitchell

Abstract read
In one paragraph

Article in Current genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Regulation ofJournal of fungi (Basel, Switzerland) · 2019
    Review
  2. Review
  3. Article
  4. Candida albicans Hyphae: From Growth Initiation to Invasion.Journal of fungi (Basel, Switzerland) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

C A WoolfordDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.
K LagreeDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.
T AleynikovDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.
A P MitchellDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA. apm1@cmu.edu.

Funding

GENETIC CONTROL OF C. ALBICANS BIOFILM FORMATIONR01AI067703 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MITCHELL, AARON P · 2006 to 2014
$3.2M
FUNCTIONAL ANALYSIS OF ESSENTIAL C. ALBICANS GENESR21AI100270 · NIAID · CARNEGIE-MELLON UNIVERSITY · PI MITCHELL, AARON P · 2012 to 2013
$422k
NIAID NIH HHS R01 AI067703NIAID NIH HHS R21 AI100270
6 · The paper itself

Abstract

The fungus Candida albicans can grow as either yeast or filaments, which include hyphae and pseudohyphae, depending on environmental conditions. Filamentous growth is of particular interest because it is required for biofilm formation and for pathogenesis. Environmentally induced filamentous growth is associated with expression of filamentation-associated genes, and both filamentous growth and associated gene expression depend upon several well-characterized transcription factors. Surprisingly, strains with reduced expression of many essential genes display filamentous growth under non-inducing conditions-those in which the wild type grows as yeast. We found recently that diminished expression of several essential protein kinase genes leads to both filamentous cell morphology and filamentation-associated gene expression under non-inducing conditions. Reduced expression of the essential protein kinase gene CAK1 promoted filamentation-associated gene expression and biofilm formation in strains that lacked key transcriptional activators of these processes, thus indicating that CAK1 expression is critical for both environmental and genetic control of filamentation. In this study, we extend our genetic interaction analysis to a second essential protein kinase gene, KIN28. Reduced expression of KIN28 also permits filamentation-associated gene expression, though not biofilm formation, in the absence of several key transcriptional activators. Our results argue that impairment of several essential cellular processes can alter the regulatory requirements for filamentation-associated gene expression. Our results also indicate that levels of filamentation-associated gene expression are not fully predictive of biofilm formation ability.

Indexed as

Gene Expression Regulation, FungalBiofilmsCandida albicansCulture MediaCyclin-Dependent KinasesFungal ProteinsGene Expression ProfilingHyphaeMutationPhenotypeProtein Serine-Threonine KinasesTranscription FactorsCulture MediaCyclin-Dependent KinasesFungal ProteinsProtein Serine-Threonine KinasesTranscription FactorsCandida albicansEPI-induced filamentationGene expressionMutant strainsProtein kinases

Identifiers

PMID28501989
PMCPMC5669822

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.