Evidence map›Paper›PMID 28501704›Full record

ArticleThe Journal of nutritional biochemistry2017

Genetic variation in SLC7A2 interacts with calcium and magnesium intakes in modulating the risk of colorectal polyps.

Pin Sun, Xiangzhu Zhu, Martha J Shrubsole, Reid M Ness, Elizabeth A Hibler, Qiuyin Cai, Jirong Long, Zhi Chen, Guoliang Li, Lifang Hou and 5 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in The Journal of nutritional biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Pin SunDepartment of Occupational Health and Toxicology, School of Public Health, Fudan University, Shanghai, China 200032.
Xiangzhu ZhuDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203; Geriatric, Research, Education and Clinical Center (GRECC), Department of Veterans Affairs, Tennessee Valley Healthcare System, Nashville, TN 37212.
Martha J ShrubsoleDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203; Geriatric, Research, Education and Clinical Center (GRECC), Department of Veterans Affairs, Tennessee Valley Healthcare System, Nashville, TN 37212.
Reid M NessDivision of Gastroenterology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Elizabeth A HiblerDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Qiuyin CaiDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Jirong LongDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Zhi ChenDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Guoliang LiDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Lifang HouInstitute for Public Health and Medicine, Northwestern University, Chicago, IL.
Walter E SmalleyGeriatric, Research, Education and Clinical Center (GRECC), Department of Veterans Affairs, Tennessee Valley Healthcare System, Nashville, TN 37212; Division of Gastroenterology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Todd L EdwardsDivision of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203; Geriatric, Research, Education and Clinical Center (GRECC), Department of Veterans Affairs, Tennessee Valley Healthcare System, Nashville, TN 37212.
Edward GiovannucciDepartments of Nutrition and Epidemiology, Harvard School of Public Health, Boston, MA.
Wei ZhengDepartment of Occupational Health and Toxicology, School of Public Health, Fudan University, Shanghai, China 200032; Division of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203.
Qi DaiDepartment of Occupational Health and Toxicology, School of Public Health, Fudan University, Shanghai, China 200032; Division of Epidemiology, Department of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37203. Electronic address: qi.dai@vanderbilt.edu.
Vanderbilt University · USFudan University · CNGeriatric Research Education and Clinical Center · USVA Tennessee Valley Healthcare System · USHarvard University · USNorthwestern University · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
Understanding and Controlling p120 Dysfunction in CRCP50CA095103 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2002 to 2017
$33.6M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Translating gene-calcium interactions to precision medicine for colorectal cancerU01CA182364 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DAI, QI, EDWARDS, TODD L · 2014 to 2019
$2.9M
Genetic and Endocrine Pathways Linking Obesity with Prostate CancerR01CA121060 · NCI · VANDERBILT UNIVERSITY · PI FOWKE, JAY H. · 2007 to 2011
$2.8M
Methylomic biomarkers for magnesium deficiency and colon neoplasia preventionR01CA202936 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DAI, QI, HOU, LIFANG · 2016 to 2019
$2.5M
Dietary Calcium and Magnesium, Genetics, and Colorectal AdenomaR01AT004660 · NCCIH · VANDERBILT UNIVERSITY · PI DAI, QI · 2008 to 2011
$2.1M
Personalized Prevention of Colorectal CancerR01CA149633 · NCI · VANDERBILT UNIVERSITY · PI DAI, QI, YU, CHANG · 2010 to 2014
$2.0M
NCCIH NIH HHS R01 AT004660NCI NIH HHS P30 CA068485NCI NIH HHS P50 CA095103NCI NIH HHS R01 CA121060NCI NIH HHS R01 CA149633NCI NIH HHS R01 CA202936NCI NIH HHS U01 CA182364NCRR NIH HHS UL1 RR024975NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

Solute carrier family 7, member 2 (SLC7A2) gene encodes a protein called cationic amino acid transporter 2, which mediates the transport of arginine, lysine and ornithine. l-Arginine is necessary for cancer development and progression, including an important role in colorectal cancer pathogenesis. Furthermore, previous studies found that both calcium and magnesium inhibit the transport of arginine. Thus, calcium, magnesium or calcium:magnesium intake ratio may interact with polymorphisms in the SLC7A2 gene in association with colorectal cancer. We conducted a two-phase case-control study within the Tennessee Colorectal Polyps Study. In the first phase, 23 tagging single-nucleotide polymorphisms in the SLC7A2 gene were included for 725 colorectal adenoma cases and 755 controls. In the second phase conducted in an independent set of 607 cases and 2113 controls, we replicated the significant findings in the first phase. We observed that rs2720574 significantly interacted with calcium:magnesium intake ratio in association with odds of adenoma, particularly multiple/advanced adenoma. In the combined analysis, among those with a calcium:magnesium intake ratio below 2.78, individuals who carried GC/CC genotypes demonstrated higher odds of adenoma [OR (95% CI):1.36 (1.11-1.68)] and multiple/advanced adenoma [OR (95% CI): 1.68 (1.28, 2.20)] than those who carried the GG genotype. The P values for interactions between calcium:magnesium intake ratio and rs2720574 were .002 for all adenomas and <.001 for multiple/advanced adenoma. Among those with the GG genotype, a high calcium:magnesium ratio was associated with increased odds of colorectal adenoma [OR (95% CI): 1.73 (1.27-2.36)] and advanced/multiple adenomas [1.62 (1.05-2.50)], whereas among those with the GC/CC genotypes, high calcium:magnesium ratio was related to reduced odds of colorectal adenoma [0.64 (0.42-0.99)] and advanced/multiple adenomas [0.55 (0.31-1.00)].

Indexed as

Dietary SupplementsDiet, HealthyPolymorphism, Single NucleotideAdenomaAmino Acid Transport Systems, BasicCalcium, DietaryCase-Control StudiesColonic PolypsColonoscopyColorectal NeoplasmsFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansMagnesiumMaleAmino Acid Transport Systems, BasicCalcium, DietaryMagnesiumSLC7A2 protein, humanCalciumColorectal polypsGene–nutrient interactionMagnesiumSLC7A2

Identifiers

PMID28501704
PMCPMC5583031
OpenAlexW2611715063

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.